WEB-based GEne SeT AnaLysis Toolkit

Translating gene lists into biological insights...

Summary

Result Download

Job summary

  • Enrichment method: ORA
  • Organism: hsapiens
  • Enrichment Categories: pathway_KEGG
  • Enrichment Categories: geneontology_Biological_Process
  • Enrichment Categories: geneontology_Cellular_Component
  • Enrichment Categories: geneontology_Molecular_Function
  • Interesting list: a R object. ID type: genesymbol
  • The interesting list contains 1905 user IDs in which 1904 user IDs are unambiguously mapped to 1904 unique entrezgene IDs and 1 user IDs can not be mapped to any entrezgene ID.
  • The GO Slim summary are based upon the 1904 unique entrezgene IDs.
  • Among 1904 unique entrezgene IDs, 1830 IDs are annotated to the selected functional categories and also in the reference list, which are used for the enrichment analysis.
  • Reference list: all mapped entrezgene IDs from the selected platform genome
  • The reference list can be mapped to 61506 entrezgene IDs and 18617 IDs are annotated to the selected functional categories that are used as the reference for the enrichment analysis.

Parameters for the enrichment analysis:

  • Minimum number of IDs in the category: 10
  • Maximum number of IDs in the category: 500
  • FDR Method: BH
  • Significance Level: FDR < 0.05

Based on the above parameters, 2295 categories are identified as enriched categories and all are shown in this report.

GO Slim summary for the user uploaded IDs

Each Biological Process, Cellular Component and Molecular Function category is represented by a red, blue and green bar, repectively.

The height of the bar represents the number of IDs in the user list and also in the category.

Bar charts of enriched GO Slim terms

Enrichment Results

Redundancy reduction: All Affinity propagation Weighted set cover