In Vitro Studies
Fluorescence-Activated Cell Sorting Assays: CTP was tested in a human left ventricular myocyte cell line (Celprogen; cat #36044-15) for uptake and assessment of its effects on cell viability. Cells were plated onto 6-well plates at a density of 100,000 cells per well and incubated overnight at 37°C/5% CO2. The following day media was replaced with fresh media containing 10µM CTP-Cy5.5, or a random (RAN-CY5.5) peptide. A yellow Live-Dead stain (Invitrogen; cat #L34968) was added to all wells, including the negative control or vehicle only treated controls, and cells were incubated for 30 minutes, after which media aspirated, cells washed 3x with pre-warmed phosphate-buffered saline (PBS), trypsinized, and collected. After collection, cells were washed once with PBS, fixed with 2% paraformaldehyde at room temperature for 10 mins, washed once again and resuspended in 1000 µl of PBS. Fluorescence activated cell sorting (FACS) was performed using lasers selected for live-dead and Cy5.5 fluorophores, and 10,000 cells counted in Fortessa. The data generated was gated on the presence of the live-dead stain providing the percent viability of cells [(live/(live+dead cells))*100] after treatment with various peptides.
Eurofins Toxicology Study: In vitro toxicology studies were performed by Eurofins Scientific through both their Ion Channel Profiler and Cardiac Profiler Panel and their DiscoverX’s SAFETYscan E/IC50 SELECT service. Increasing concentrations of CTP (0.1µM to 30µM) was tested against various ion channels and a total of seventy-eight assays performed utilizing various output reads, including GPCR cAMP modulation assays, calcium mobilization assays, nuclear hormone receptor assays, KINOMEscan binding assays, ion channel assays, transporter assays, and enzymatic assays. All methods described below were performed, described, and reported by Eurofins Scientific in their study report (Supplemental Methods 1 & 2).
Detailed methods can be found in Supplemental Methods 1. Electrophysiological assays were conducted on four types of channels: Voltage gated sodium channels HEK-Nav1.5 (peak), and HEK-Nav1.5 (late, antagonist); voltage gated potassium channels HEK-Kv4.3/KChIP2, CHO-hERG, and CHO-KCNQ1/minK; voltage gated calcium channel HEK-Cav1.2; and inward-rectifying voltage gated potassium channel HEK-Kir2.1. IC50 values following CTP treatment at concentrations ranging from 0.1 to 30 µM were calculated using non-linear, least squares regression analyses, and compared to reference standards.
GPCR cAMP modulation assays, calcium mobilization assays, nuclear hormone receptor assays, KINOMEscan binding assays, ion channel assays, transporter assays, and enzymatic assays were performed by Eurofins under GLP standards. Simplified methods are provided below; detailed methods can be found in Supplemental Methods 2.
GPCR cAMP Modulation Assays: cAMP Hunter cell lines were grown, plated, and subjected to Eurofins’ DiscoverX HitHunter cAMP XS+ assay. Gs agonist activity, Gi agonist activity, and antagonist activity induced assays were read using chemiluminescent signal detection. Percentage activity was calculated for Gs and Gi agonist assays, and percentage inhibition calculated for Gs antagonist assays.
Calcium Mobilization Assays: PathHunter cell lines were grown, plated, and subjected to calcium mobilization assays using the DiscoverX Calcium No WashPLUS kit. Agonist and antagonist activity of CTP was performed and measured on a FLIPR Tetra using a five second baseline read followed by 2 minutes of calcium mobilization monitoring. The area under the FLIPR curve and percentage activity was calculated to determine agonist activity, and percentage inhibition was calculated to determine antagonist activity.
Nuclear Hormone Receptor Assays: PathHunter NHR cell lines were grown, plated, and subjected to nuclear hormone receptor assays using the PathHunter Detection reagent cocktail. Chemiluminescent signals were read using a PerkinElmer Envision instrument, and percent activation and percent inhibition were calculated to determine agonist and antagonist activity, respectively.
KINOMEscan Binding Assays: Kinases were produced by the infection of BL21 E. coli using kinase tagged T7 phage strains. Cells were grown, lysed, centrifuged, filtered, and the remaining kinases produced in HEK-293 cells were tagged using DNA for detection using qPCR. Affinity resins for the kinase assays were created using Streptavidin-coated magnetic beads treated with biotinylated small molecule ligands. Kinases, beads, and CTP were combined in 1x binding buffer to perform the assay. Kinase concentrations were measured using qPCR, and percent response and binding constants were calculated.
Ion Channel Assays: Cell lines were grown, plated, and loaded with 1x loading buffer containing 1x dye and 2.5 mM Probenecid freshly prepared. Assays were performed, and activity was measured using a FLIPR Tetra. Percent activation and percent inhibition were calculated to determine agonist and antagonist activity, respectively.
Transporter Assays: Cell lines were grown, plated, and incubated first with CTP, then with 1x loading buffer containing 1x dye with 1x HBSS and 20mM HEPES. Fluorescence signals were detected using a PerkinElmer Envision, and percentage inhibition assessed.
Enzymatic Assays: AChE, COX1, COX2, MAOA, PDE3A and PDE4D2 activity assays were performed to determine CTP effects on each individual enzyme. Fluorescence was read using a PerkinElmer Envision, and percentage inhibition and compound activity calculated.
In Vivo Studies
All animal protocols were approved by the institutional animal care and committee of the University of Pittsburgh and Mayo Clinic. CTP was synthesized by the University of Pittsburgh using standard solid-state synthesis, followed by HPLC purification. MALDI LC/MS characterization of the final peptide was performed prior to use.
Blood Pressures Pre and Post CTP Injection: Six B6-wildtype mice were obtained from the Jackson Laboratory. Blood pressures were taken using a non-invasive blood pressure system from Kent Scientific. Mice were anesthetized using 2.5% isoflurane exposure for 5 minutes, placed in a tube holder, and warmed using a warming blanket for approximately 15 minutes before their tails were fitted with blood pressure cuffs. 21 blood pressure readings were taken, and average systolic and diastolic blood pressure calculated. After baseline blood pressure was established, mice were injected intravenously with 10mg/kg of CTP, and blood pressures were measured again 6 hours post-injection.
Mouse Toxicity Studies: Sixty CD1-wildtype mice (1:1 male to female ratio) were obtained from Charles River and divided into 6 groups of 10, 5 females and 5 males each. Ten control mice were injected with 1X PBS. Treated mice were injected intravenously with a single dose of CTP 150ug/Kg. Groups of 10 treated mice (5 male, 5 female) were euthanized on day 0 (immediately after injection), 1, 2, 7, and 14 post-injection using inhalational CO2. After euthanasia, chest cavity was opened, and blood drawn via cardiac puncture for complete blood count and serum chemistries. Following the blood draw, the right atrium was nicked and the whole animal perfusion fixed using 3ml of formalin injected into the left ventricular apex. The control group was euthanized on day 2. A complete blood count, metabolic profile and thyroid studies were performed.
Cardiac Function Studies, Pre and Post Injections: Six CD1, wild type, 6–8-week-old adult mice were obtained from Charles River and used for cardiac MRI studies. Mice were weighed, anesthetized with 2.5% isoflurane, and ear tags removed before being inserted into the MRI scanner. A baseline cardiac MRI was performed, followed by intravenous CTP injection (150 µg/Kg). Post-injection, a second cardiac MRI was performed.
Real Time quantitative PCR: Based on the results of the Eurofins Toxicology Study (Figure 3), targets for qPCR were identified for expression of the activated receptors, OPRM1, COX1, and COX2 in mouse hearts. Heart, brain, kidney, liver, and lungs were harvested from an untreated, wild-type CD1, adult mouse, and snap frozen in liquid nitrogen. RNA extraction was performed using the Qiagen RNeasy Micro Kit and cDNA libraries prepared using the high-capacity RNA to cDNA kit (Applied Biosciences). RT-qPCR was performed (ABI Quant) using PowerUp SYBR Green Master Mix (Applied Biosciences). Results were normalized to GAPDH expression.