1. Introduction
Since WHO first characterized COVID-19 as a pandemic on March 11, 2020 [
1], researchers have developed various medications and vaccines to improve therapies and control.
SARS-CoV-2 infection provides natural immunity due to the virally-induced humoral and cellular memory response. But both disease- and vaccine-induced immunity tend to wane over time [
2,
3]. As the Omicron variant (B.1.1.529) and its subvariants have emerged globally and spread rapidly, a high risk of breakthrough infection and reinfection has been observed in vaccinees and those previously infected [
4]; thus, the necessity for vaccine booster doses. Recent studies suggest that hybrid immunity (natural plus vaccination) is longer lasting and more effective than disease-induced immunity or vaccination alone [
5], emphasizing the importance of vaccinating previously infected individuals.
In Cuba, five COVID-19 vaccines have been developed [
6]. Abdala vaccine and Mambisa vaccine candidate (from now onwards Abdala and Mambisa) are obtained and manufactured at Havana’s Center for Genetic Engineering and Biotechnology (CIGB). Both are recombinant protein subunit vaccines based on the receptor binding domain (RBD) fragment of the SARS-CoV-2 spike protein S produced in
Pichia pastoris yeast (now
Komagataella phaffii) [
7]. In Abdala, RBD is adjuvanted with aluminum hydroxide gel and injected intramuscularly. Mambisa’s formulation includes RBD plus the hepatitis B virus core antigen (HBcAg) expressed in
Escherichia coli; it does not contain adjuvant and its application is intranasal. The rationale of this nasal vaccine is based on the SARS-CoV-2 transmission route, due to its respiratory tropism. Mambisa’s benefits include antigen delivery at the infection site, elicitation of respiratory tract mucosal immunity and needle-free administration.
Previous clinical trials for Abdala and Mambisa assessed safety and immunogenicity in three-dose schedules in seronegative adults [
8,
9], and also, as a booster dose in healthy adults [
10]. Abdala was the first COVID-19 vaccine approved in Cuba for emergency use [
11], and was a turning point for epidemic control in the country [
12,
13]. Studies with Abdala have also been conducted in children, adolescents and pregnant women [
14,
15].
The aim of this study was to assess safety and immunogenicity of Abdala and Mambisa administered as boosters for COVID-19 convalescents.
2. Materials and Methods
2.1. Vaccines
Abdala contains 50 µg RBD per 0.5 mL [
11], and is administered in the deltoid region. Mambisa contains 50 µg RBD plus 40 µg HBcAg per 0.2 mL (0.1 mL per nostril). The RBD antigen sequence is identical to the ancestral SARS-CoV-2 Wuhan-Hu-1 strain (NCBI Acc. No. YP_009724390). Both products were stored at 2‒8
oC, as recommended. Mambisa was approved by the Center for State Control of Medicines, Equipment and Medical Devices (CECMED) for this study [
16].
2.2. Nasal Devices for Vaccine Delivery
Three nasal devices were used for Mambisa administration: an intranasal atomization device or atomizer (a prototype employed in Phase 1 [CNEURO, Cuba] similarly designed as the commercial device employed in Phase 2 [Wuxi NEST Biotechnology, China]), identified as AZ; a nasal spray (Gaasch Packaging, UK), identified as S; and a nasal dropper (Sopac Medical, France), identified as D. (See Supplementary materials for details).
2.3. Trial Design
A phase 1-2, prospective, multicenter, randomized, open-label clinical trial, with parallel groups, was designed to assess safety and immunogenicity of Mambisa and Abdala in boosting COVID-19 immunity of convalescent adults, after receiving a single dose of either vaccine.
Phase 1 was an exploratory study to select (in terms of safety and immunogenicity) the appropriate nasal device for Mambisa administration. The selected device was used in Phase 2, to confirm and reinforce Phase 1 results.
Figure 1 shows the study flow diagram. In Phase 1, enrollment of 120 participants was completed at the Hermanos Ameijeiras Clinical-Surgical Hospital in Havana, Cuba (
Figure 1A). Phase 2 included 1041 participants (
Figure 1B) enrolled at Hermanos Ameijeiras Clinical-Surgical Hospital and three more clinical sites in other cities: Manuel Ascunce Domenech Provincial Clinical-Surgical Teaching Hospital (Camagüey), Pedro Raúl Sánchez Teaching Polyclinic (Pinar del Río) and Saturnino Lora Provincial Clinical-Surgical Hospital (Santiago de Cuba).
The trial was conducted in certified vaccination areas at each clinical site, and participants were vaccinated by nurses certified for this procedure. Monitors verified this process at each site, as well as accuracy of case report forms (CRF) and good clinical practice (GCP) procedures.
2.4. Participants
Inclusion criteria: Subjects aged 19‒80 years, COVID-19 convalescents, at least two months after recovery, healthy or with compensated comorbidities. All convalescents had been infected with SARS-CoV-2 before November 2021.
Exclusion criteria: Listed in
Figure 1 and detailed in Supplementary materials.
2.5. Variables
Safety. Adverse events (AE) type (local or systemic), duration, severity and causal relationship. Severity was classified as not severe or severe (when hospitalization or its prolongation was required, the reaction was life-threatening or contributed to a patient’s death). AE intensity was established in three levels: (a) mild, vaccination well tolerated, caused minimal discomfort and did not interfere with daily activities; (b) moderate, annoying enough to interfere with daily activities, and (c) severe, when interrupted daily activities.
Immunogenicity. Increase of serum IgG and IgA antibody titer against RBD; percentage inhibition of RBD-ACE2 (angiotensin-converting enzyme 2) binding; and neutralizing antibody (NAb) levels for live SARS-CoV-2 variants.
2.6. Sample Size
For Phase 1, four 30-person experimental groups (120 in total) were established. This exploratory phase did not require controlling the significance level or power. In Phase 2, the number of subjects was a function of the number of individuals who met the main success criterion of Phase 1. Considering 10% dropout, N = 232 subjects were calculated for each of the four strata provided (Mambisa, age ≤60; Mambisa, age >60; Abdala, age ≤60; Abdala, age >60), making it necessary to recruit 928 subjects. The significance level defined (α = 0.0125) guaranteed a global significance level α = 0.05 and a power of 85% to conduct the four hypothesis tests, which constituted the main objectives for analysis.
2.7. Randomization
In both study phases, two control variables were taken into account for participants’ randomization: age and clinical category of COVID-19 infection. Age was stratified into two groups: ≤60 and >60 years. The clinical category of COVID-19 disease was stratified by: symptoms (symptomatic or asymptomatic) and severity of symptoms (mild, moderate or severe).
In Phase 1, subjects were randomly distributed into four groups. Three were assigned to Mambisa, differentiated according to the device used for IN delivery. The fourth group received Abdala (
Figure 1A).
In Phase 2, subjects were randomized in two groups, for Abdala and Mambisa vaccination (
Figure 1B). Enrollment/allocation was made after the main researcher verified compliance with the subject selection and exclusion criteria.
Randomization lists for both phases were prepared by the trial statistical administrator using the Random Allocation Software for Windows (v 1.2).
2.8. Intervention
The Abdala group received a booster dose of 0.5 mL, intramuscularly (deltoid region). Those in Mambisa groups received a booster dose of 200 µL (100 µL per nostril), using the corresponding nasal application device. For intranasal administration, each participant was seated with the head slightly tilted back with support throughout the procedure. The product was applied into the first nostril after exhaling, keeping the head position for one minute; the same procedure was repeated in the other nostril. Mambisa vaccine application is detailed in Supplementary materials.
2.9. Outcomes
Primary outcomes were safety (severe AE with a causal relationship attributable to the studied products occurring in <5% of subjects) and immunogenicity. The main criterion for immunogenicity success was: ≥4-fold anti-RBD IgG seroconversion or ≥20% increase in RBD-ACE2 inhibitory antibodies with respect to baseline in >55% of vaccinees in Phase 1 and >70% in Phase 2. Secondary endpoints were: anti-RBD IgA titers, percentage of RBD-ACE2 inhibition and NAb against live SARS-CoV-2 variants. For IgA and NAb, seroconversion was defined as 4-fold increase in antibody titers.
2.10. Procedures
Safety. This was evaluated according to report and description of AE occurring within one-hour post-vaccination and during the follow-up of vaccinees. Vital signs were monitored before and after vaccine administration. As vaccination was an outpatient treatment, participants were required to record any AE in an Adverse Event Diary, shared with investigators during follow-up evaluations. In Phase 1, safety monitoring was carried out for 28 days and in Phase 2 for 14 days post-vaccination. AE type, duration, severity, outcome, and causality relationship were carefully registered. Systemic AE (headache, fever, nausea and hypertension, among others), were especially sought. Local adverse reactions associated with IM (pain at the injection site, erythema and induration, among others) or with IN vaccination (as rhinitis), were also explored.
Immunogenicity. Peripheral blood samples were collected on day 0 (baseline), before booster dose application, and 14 days after vaccination, to carry out hematology, clinical chemistry and immunogenicity assessments. Serum samples were aliquoted and stored at ‒20 oC until evaluation.
Immunogenicity assessment was based on seroconversion and geometric mean titers (GMT) of RBD-specific IgG and IgA antibodies, inhibition percentage of RBD-ACE2 binding, as proportions and means, and NAb levels for live SARS-CoV-2, expressed as GMT proportions.
IgG antibodies were quantified by UMELISA anti-SARS-CoV-2 RBD (Immunoassay Center, Cuba). Titers were given in arbitrary units per mL (AU/mL) with a detection limit of 1.95. ACE2-RBD antibody inhibition properties were determined using an in-house surrogate virus neutralization test inhibition (CIGB, Cuba). Results were given in inhibition percentages. The assay positivity threshold was 20%. Both methods have been described by Lemos-Pérez et al. [
17].
IgA antibodies were quantified by an in-house ELISA test (CIGB, Cuba). Titers were given in AU/mL with a detection limit of 0.6. (See Supplementary materials)
NAb titers were detected by a viral microneutralization assay (MNA) using the live SARS-CoV-2 variants of concern (VOC) D614G (30654/21 D614G 1PVE6), Beta (34959/21 1PVE6 South Africa) and Delta (57383/21 Delta 1PVE6) in Phase 1, and D614G and Omicron (8649/22 OMICRON BA1 1PVE6) in Phase 2. Vero E6 cells (ATCC No. CRL-1586) were used for isolating passaging and MNA. Serum samples were heat-inactivated at 56 °C for 30 min and diluted in serial twofold dilutions (from 1:10 to 1: 2560) in microtiter plates. NAb titers were calculated using the Reed and Muench method as described by Johnson et al. [
18] Viral MNA was performed at the Pedro Kourí Tropical Medicine Institute (IPK, Cuba) under biosafety level 3 (BSL-3) conditions. NAb titers were calculated as the highest serum dilution without cytopathic effect on day 5 post-infection. For NAb titer <10, a final value of 5 was assigned for statistical calculations.
2.11. Data Management
Subject information was recorded chronologically in the medical record (MR) and the CRF. Electronic entries in CRFs using the XAVIA_SIDEC software (UCI, Cuba), were carried out at clinical sites by clinical research coordinators, authorized researchers participating in the study, or by the clinical site coordinator. Database creation and validation were conducted at the National Clinical Trials Coordinating Center (CENCEC, Cuba). New entries or modifications of information collected in the CRF were recorded in auditable system traces.
2.12. Statistical Methods
We assessed safety and immunogenicity primary outcomes by intention-to-treat (ITT) (i.e., subjects who underwent randomization) and per-protocol (PP) analyses (i.e., subjects who, in compliance with the protocol, received a booster dose of vaccine according to protocol requirements, and had serum-test results before and after immunization). To evaluate vaccination effect, the main analysis consisted in applying one-sided test of comparison of a proportion with a reference value. The hypotheses tested were: H0 = π ≤ π0 (null hypothesis) and H1 = π > π0 (alternative hypothesis), where π represents the proportion of subjects who met the main success criterion or vaccine responders and π0 is the reference value for comparison. The hypotheses were examined in each of the four vaccination groups or strata conceived in both phases of the study. The level of significance (α = 0.0125), set at a quarter of the nominal value, guaranteed a global significance level α = 0.05. Pearson χ2 test or Fisher’s exact test were used to analyze categorical outcomes. We calculated 95% confidence intervals (95% CI) for all categorical outcomes using the Clopper-Pearson method.
Immunogenicity analyses based on quantitative results of immune response were performed in the PP population. Anti-RBD specific IgG and IgA were determined using seroconversion rates and geometric titers (GMT). The percentage of RBD-ACE2 inhibition was determined by seroconversion rates (percentage increase ≥20%) and means. NAb titers were measured by seroconversion rates and GMT. Estimates of vaccination effect size were determined using the median of differences (MD). The 95% CIs were determined in all cases. Lilliefors or Shapiro-Wilks tests were used to prove the normality of linear model residues comparing two or more groups. Wilcoxon matched-pairs signed rank test (p <0.05) was used to statistically compare pre- and post-vaccination outcomes. SAS for Windows (version 9.3), SPLUS (version 6.2) and SPSS (version 25) and GraphPad Prism (v. 9.4.1) were used for data processing and analysis.
4. Discussion
Although most of the world population is recovering from the COVID-19 pandemic, having a vaccine to boost immunity against SARS-CoV-2 VOCs is of utmost importance.
In our study, a booster dose was applied to COVID-19 convalescents to evaluate the capacity of both vaccines to enhance immune response to SARS-CoV-2. As these products have different formulations and administration routes, their mechanisms for inducing response at the immune system’s local and systemic levels differ, too. Thus, the results obtained should not be expected to be exactly the same, but should meet the study’s established success outcomes.
Regarding safety, no serious AE were recorded. AE reports were minimal, mostly of mild intensity and short duration, which resolved spontaneously. Headache is a common systemic vaccine AE that was observed for both vaccines. Pain at the injection site was the most frequent local reaction for Abdala and rhinitis for Mambisa, as expected for IM and IN vaccines, but of very low incidence. These safety results were consistent with previous studies conducted with both vaccines [
8,
9,
12].
In previous Phase 1-2 and Phase 3 clinical trials in seronegative adult populations, Abdala demonstrated to be safe and well tolerated in its three-dose schedule, and vaccine reactogenicity was dose-independent [
8,
12]. Pain at the injection site is consistent with findings for other COVID-19 IM vaccines [
19]. Abdala’s safety has also been evaluated in children and adolescents aged 3–18 years [
14], in pregnant women [
15], and as a booster dose for seronegative individuals [
8], with the same results.
Emergence of new SARS-CoV-2 variants, such as Omicron and its sub-variants, has revealed substantial immune evasion in serum samples from infected persons [
20], or in seronegative persons who received two-dose vaccine schedules [
21]. A booster dose can substantially increase neutralizing antibodies and surrogate markers, such as anti-RBD titers. It also allows an improved immune response to different SARS-CoV-2 VOC, and can reduce reinfection rates, or, if reinfection occurs, at least ensure milder symptoms. The booster dose also helps to stimulate immune response among people who do not respond to standard vaccination schedules, such as immunocompromised individuals [
22].
The proposed success criteria for vaccine immunogenicity were met in both phases of this clinical trial. Eighty percent of those vaccinated with Abdala and 75% receiving Mambisa showed an increase in anti-RBD IgG titers and/or at least RBD-ACE2 inhibition percentages.
In previous studies, Abdala has shown to be highly immunogenic [
8,
10,
23]. One of the reasons proposed is the presence of mannose structures in the recombinant RBD protein expressed in the yeast. These carbohydrate structures act as strong adjuvants and are easily detected by the receptors of antigen-presenting cells, promoting antigen presentation and T cell activation [
8,
24].
The humoral response induced by the IM route will protect the lower respiratory tract, but will not activate tissue-specific resident memory cells, necessary for long lasting protection in the upper respiratory tract and reduction of transmission rates [
25,
26]. Mucosal immunization can induce extensive adaptive immune responses, characterized by secretory IgA antibodies [
27]. It can also effectively stimulate a potent systemic immune response and generate serum antibodies with neutralizing properties, reflecting the interaction between the mucosal and systemic immune systems [
27].
We observed that COVID-19 convalescents boosted with Abdala elicited a strong systemic humoral response. In both study phases, anti-RBD IgG median titers increased more than 40-fold after the booster dose, and in the case of the mean of inhibition percentages, increased more than 50%. Anti-RBD IgA titers also increased.
Since the three devices used for nasal delivery in the exploratory study (Phase 1) exhibited similar results, the most readily available device was chosen for Phase 2. This atomizer permits precision dosing of the vaccine into the atrium or anterior region of the nasal respiratory epithelium, allowing immunogen contact in the nasal environment [
28].
Although the study’s endpoints were based exclusively on systemic immunogenicity variables, Mambisa vaccinees showed a strong humoral immune response after the booster dose. In Phase 2, anti-RBD IgG titers increased more than 5-fold, and in the case of antibody inhibition capacity, they increased more than 30%. Also, anti-RBD IgA titers increased more than 2000 AU/mL.
Mambisa’s HBcAg immunopotentiating capacity favored local and systemic immune response to the vaccine through multiple toll-like receptor signaling pathways [
29]. Similar results of increased systemic humoral response from IN vaccination have been observed elsewhere, including vaccines based on adenovirus vectors, such as the ChAdOx1 nCoV-19 vaccine [
30]. For example, in a phase 3 study, the BBV154 nasal vaccine showed higher humoral immune response compared to Covaxin (BBV152), a vaccine comprised of inactivated SARS-CoV-2 and administered IM in two doses. At 42 days post-vaccination, participants showed 2- and 1.5-fold increases in serum IgG and IgA antibody levels, respectively [
31].
Regarding viral neutralization, both vaccines showed significantly-increased NAb titers after the booster dose. In Phase 1, different responses were observed to the different variants, with the highest NAb titers against Delta and Beta VOCs, and lower titers against D614G. It was interesting, because generally, COVID-19 vaccines have shown a lower neutralizing response to the Beta variant [
32]. In this study, the booster dose was found to significantly enhance responses to various variants, with particularly substantial increases observed against the Beta and Delta variants. An explanation could be that Beta and Delta variants were the ones that had circulated the most in Cuba before the recruitment of volunteers for this study and the results show the ability of the vaccines to recall B cells that produce high-affinity antibodies against the epitopes conserved between the different variants. These findings underscore the critical role of booster doses for convalescent individuals and highlight the robust response generated by hybrid immunity. Additionally, the significant increase in response to Delta can be explained by its local circulation; it was dominant at the time when most of the volunteers were infected with the virus [
33].
In Phase 2, post-booster antibodies showed neutralization activity against Omicron in both vaccination groups. Noteworthy is the fact that convalescents enrolled in the study were infected before November 2021, when Omicron variants were not yet circulating in Cuba [
32]. This corroborates previous reports referring that Omicron’s immune evasion seems to be less pronounced in individuals with hybrid immunity resulting from prior infection and vaccination [
5].
We observed no difference in compliance with the trial success criteria, for subjects ≤60 and >60 years of age, in both vaccine groups. As analyzed in Phase 2, systemic anti-RBD IgG and IgA levels were higher in those aged >60 years. RBD-ACE2 inhibitory activity percentages were similar for both age groups. However, older adults also showed higher NAb titers against D614G and Omicron VOCs, with titers against the ancestral variant being 2-fold higher. In those vaccinated with Abdala, MD values were twice as high in older adults compared to younger individuals.
Effectiveness of COVID-19 vaccines depends largely on the titers of SARS-CoV-2 neutralizing antibodies [
34], regardless of vaccine type, but with a booster dose effective in increasing these antibody titers in older adults [
35]. In our study, the best neutralizing antibody response was seen in convalescents >60 years of age, in both IN and IM routes. It is well known that older adults are most susceptible to infections, due to more restricted antibody and T cell repertoires, which limits de novo generation of antibodies [
36]. However, in previous studies with the BNT162b2 vaccine, enhancement of a strong memory B cell response was observed in individuals >60 years of age after booster doses, showing a greater increase than younger subjects [
37]. A study in 2022 postulated that presence of increased population of RBD-specific memory (CD27
+ CD21
–) B cells in older adults may indicate prolonged persistence of the virus and, therefore, B-cell activation following SARS-CoV-2 infection [
38]. This could explain the higher humoral response to vaccination in this age group, results that were unrelated to convalescents’ record of disease severity. The best neutralization results observed in subjects >60 years of age in our study corroborates results obtained when comparing the levels of IgA and IgG antibodies, with anti-RBD activity due to the booster dose, being the most responsible for the neutralizing capacity of the samples.
Our study has two main limitations. First, we were unable to measure secretory IgA and Tissue-resident memory T cells or TRM cells at the mucosal level, a helpful analytical tool to demonstrate upper respiratory tract immune status before and after the booster dose. Second, anti-RBD IgG titers were expressed in AU/mL, since at the time of the evaluations, the reference material employed by the UMELISA anti-SARS-CoV-2 RBD was not yet calibrated against the WHO International Standard for anti-SARS-CoV-2 immunoglobulin.
This is the first clinical-study report featuring a nasal subunit vaccine targeting COVID-19. Additionally, this study also demonstrated the capacity of the particulate antigen from the hepatitis B virus nucleocapsid to stimulate the immune response when administered through the nasal route.
Abdala and Mambisa proved to be highly immunogenic. A booster dose in individuals previously infected with the SARS-CoV-2 strengthened the immune response, resulting in better protection against new viral variants. Additionally, both vaccines are easy to apply and store, since they do not need low storage temperatures required for some other COVID-19 vaccines.
Author Contributions
Conceptualization, Yinet Barrese-Pérez, Rolando Uranga-Piña and Gerardo Guillén-Nieto; Data curation, Yinet Barrese-Pérez, Rolando Uranga-Piña, Yisel Avila-Albuerne, Iglermis Figueroa-García, Osaida Calderín-Marín, Martha Gómez-Vázquez and Marjoris Piñera-Martínez; Formal analysis, Yinet Barrese-Pérez and Rolando Uranga-Piña; Funding acquisition, Miladys Limonta-Fernández, Marta Ayala-Avila, Eduardo Martínez-Díaz and Eulogio Pimentel-Vazquez; Investigation, Gilda Lemos-Pérez, Yahima Chacón-Quintero, Yisel Avila-Albuerne, Iglermis Figueroa-García, Osaida Calderín-Marín, Martha Gómez-Vázquez, Marjoris Piñera-Martínez, Sheila Chávez-Valdés, Ricardo Martínez-Rosales, Lismary Ávila-Díaz, Amalia Vázquez-Arteaga, Hany González-Formental, Giselle Freyre-Corrales and Edelgis Coizeau-Rodríguez; Methodology, Gerardo Guillén-Nieto; Project administration, Iglermis Figueroa-García and Gerardo Guillén-Nieto; Supervision, Yinet Barrese-Pérez, Yisel Avila-Albuerne, Iglermis Figueroa-García, Osaida Calderín-Marín, Martha Gómez-Vázquez and Marjoris Piñera-Martínez; Writing – original draft, Gilda Lemos-Pérez; Writing – review & editing, Gerardo Guillén-Nieto.