BRIEF REPORT
|
doi:10.20944/preprints202407.2052.v1
Subject:
Biology And Life Sciences,
Other
Keywords:
Smith-Magenis syndrome; retinoic acid-induced 1 protein; neurodevelopmental disorders; joint whole genome sequencing analysis
Online: 26 July 2024 (11:45:07 CEST)
REVIEW
|
doi:10.20944/preprints201806.0036.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
varicella-zoster virus; latency; reactivation; sensory ganglia; VZV latency-associated transcript; open reading frame 63; RNA-sequencing; epigenetics; immunity
Online: 4 June 2018 (11:49:09 CEST)
ARTICLE
|
doi:10.20944/preprints202307.0587.v1
Subject:
Public Health And Healthcare,
Public Health And Health Services
Keywords:
beef production chain; Listeria innocua; whole-genome sequencing; sequence type; an-timicrobial resistance genes; virulence gene; South Africa
Online: 10 July 2023 (09:48:11 CEST)
ARTICLE
|
doi:10.20944/preprints202309.0748.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
SARS-CoV-2; coronavirus; monoclonal antibodies; resistance; nanopore; Sweden; whole-genome sequencing; receptor binding domain
Online: 12 September 2023 (11:14:08 CEST)
REVIEW
|
doi:10.20944/preprints202208.0220.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
Molecular switches; oncolytic vectors; patient-specific ubiquitous mutations; targeted therapy; multi-region sequencing; molecular biology
Online: 11 August 2022 (11:50:12 CEST)
ARTICLE
|
doi:10.20944/preprints202112.0461.v1
Subject:
Medicine And Pharmacology,
Cardiac And Cardiovascular Systems
Keywords:
Hypertrophic Cardiomyopathy; Left ventricular outflow tract obstruction; single nucleus RNA-sequencing; dendritic cells; integrin-b1.
Online: 29 December 2021 (09:43:00 CET)
ARTICLE
|
doi:10.20944/preprints202108.0104.v1
Subject:
Biology And Life Sciences,
Anatomy And Physiology
Keywords:
quantitative metagenomics; microbiome; obesity; gut microbiota; microbial DNA extraction; sequencing; Simulation; Oxford Nanopore Technologies; MinION
Online: 4 August 2021 (09:44:24 CEST)
ARTICLE
|
doi:10.20944/preprints201811.0623.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
genomic selection; genomic prediction; genotyping by sequencing; pasmo resistance; pasmo severity; quantitative trait loci; single nucleotide polymorphism; Septoria linicola; flax
Online: 30 November 2018 (08:39:11 CET)
TECHNICAL NOTE
|
doi:10.20944/preprints202201.0353.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
RNA sequencing; metabolomics; data visualization; overrepresentation analysis; cluster analysis; principal component analysis; scientific plotting; Mapman; Mercator
Online: 24 January 2022 (12:36:04 CET)
TECHNICAL NOTE
|
doi:10.20944/preprints202102.0410.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Phage Purification; phage isolation; phage characterization; jumbo bacteriophages; top agar; double agar overlay; high throughput sequencing
Online: 19 February 2021 (09:53:32 CET)
REVIEW
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
continuous evolution; protein design; protein engineering; phage; bacterial one-hybrid; plaque assay; mutational analysis; DNA sequencing
Online: 5 November 2019 (02:19:01 CET)
ARTICLE
|
doi:10.20944/preprints202402.0355.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
Mn porphyrin clinical candidate, MnTnBuOE-2-PyP5+ (BMX-001, MnBuOE); Single-cell RNA sequencing; Tumor heterogeneity; Tumor microenvironment; Radiotherapy; Tumor radiosensitization
Online: 6 February 2024 (09:43:28 CET)
REVIEW
|
doi:10.20944/preprints202405.1276.v2
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
immune-mediated inflammatory diseases; single-cell sequencing; multi-tissue atlas; cross-tissue atlas; human cell atlas; integrative analysis; precision medicine
Online: 6 June 2024 (12:45:14 CEST)
ARTICLE
|
doi:10.20944/preprints202310.0273.v1
Subject:
Biology And Life Sciences,
Endocrinology And Metabolism
Keywords:
NAFLD; SMPD3; Lipotoxicity; HepG2; TNF-α; sphingomyelin pathway; RNA sequencing; Oil Red O staining; fat accumulation; Obesity
Online: 5 October 2023 (09:27:30 CEST)
ARTICLE
|
doi:10.20944/preprints202210.0412.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
biolog phenotypic technology; Candida; energy-dispersive X-ray spectroscopy; genotype; multilocus DNA sequencing; one new taxon; yeast
Online: 26 October 2022 (10:15:55 CEST)
REVIEW
|
doi:10.20944/preprints202104.0602.v2
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
cancer; DNA sequencing; DNA synthesis; enzyme; free-radicals; genome; HPV; oncogenes; retinoblastoma; ribonucleotide reductase; RnR; SMT; TCGA
Online: 6 July 2021 (11:32:47 CEST)
BRIEF REPORT
|
doi:10.20944/preprints202105.0526.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
SARS-CoV-2 virus; complete genome sequencing; COVID-19 RT-PCR testing; Spike protein; vi-ral variants
Online: 21 May 2021 (15:12:17 CEST)
ARTICLE
|
doi:10.20944/preprints201811.0183.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
sequencing technologies; NGS; genome research; genome assembly; variant calling; RNA-Seq; transcriptome assembly; bioinformatics; molecular biology; education
Online: 13 November 2018 (10:22:06 CET)
ARTICLE
|
doi:10.20944/preprints201805.0379.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
anaerobic digestion; Co-digestion; CSTR; BMP-test; Illumina sequencing; T-RFLP; glycoside hydrolase families 5 and 48
Online: 27 May 2018 (12:53:51 CEST)
ARTICLE
|
doi:10.20944/preprints202308.0332.v2
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
homologous recombination deficiency (HRD); biomarkers; ovarian cancer; DNA repair; BRCA1/2; poly (ADP–ribose) polymerase inhibitors (PARPi); next generation sequencing (NGS)
Online: 6 September 2023 (09:09:09 CEST)
ARTICLE
|
doi:10.20944/preprints202401.0728.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
Hypermucoviscous1; Klebsiella pneumoniae2; Hypervirulent3; Mobile genetic elements4; capsule serotypes5; Virulence6; Whole genome sequencing7; sequence types8
Online: 10 January 2024 (03:51:05 CET)
ARTICLE
|
doi:10.20944/preprints202012.0252.v1
Subject:
Social Sciences,
Psychology
Keywords:
Fear extinction; Fear Conditioning; Medial Prefrontal Cortex; RNA sequencing; Differential Gene Expression; Electrophysiological Recordings; Excitatory Post-Synaptic Currents; Spinogenesis; Fear-related Disorders
Online: 10 December 2020 (11:38:50 CET)
ARTICLE
|
doi:10.20944/preprints202306.1284.v1
Subject:
Medicine And Pharmacology,
Other
Keywords:
case reports; clinical management; CVS; disease mechanisms; DNA sequencing; gene expression; genetic testing; genetics; personalized medicine; vagal afferents
Online: 19 June 2023 (04:22:25 CEST)
REVIEW
|
doi:10.20944/preprints201801.0109.v1
Subject:
Social Sciences,
Psychology
Keywords:
dyslexia; reading; magnocellular neurons; vision; hearing; phonology; sequencing; timing; temporal processing; transient; coloured filters; rhythm; music; omega 3s
Online: 12 January 2018 (07:15:33 CET)
ARTICLE
|
doi:10.20944/preprints202311.1617.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Chromatin immunoprecipitation followed by sequencing; transcription factors binding sites prediction; cooperative binding of transcription factors; motifs conservation; classification of transcription factors; direct binding of transcription factors
Online: 27 November 2023 (07:26:54 CET)
DATA DESCRIPTOR
|
doi:10.20944/preprints202311.1869.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
Acinetobacter baumannii; healthcare-associated infections; genomic epidemiology; whole genome sequencing; cgMLST; international clones of high risk; antibiotic resistance
Online: 29 November 2023 (10:59:38 CET)
ARTICLE
|
doi:10.20944/preprints202309.2039.v1
Subject:
Public Health And Healthcare,
Public Health And Health Services
Keywords:
newborn screening; genome sequencing; ethical; legal; social implications (ELSI); NBSTRN; public health; databases; online tools; Recommended Uniform Screening Panel (RUSP)
Online: 29 September 2023 (04:28:14 CEST)
COMMUNICATION
|
doi:10.20944/preprints202206.0374.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
antimicrobial resistance; CTX-M-1; Enterobactericeae,; Escherichia coli; extended-spectrum β-lactamase; food safety; IncI1; next-generation sequencing; One Health; virulence
Online: 28 June 2022 (04:18:22 CEST)
ARTICLE
|
doi:10.20944/preprints202109.0415.v2
Subject:
Biology And Life Sciences,
Virology
Keywords:
Delta variant; Variants of concern; Variants of interest; SARS-CoV-2; Spike protein; Nested RT-PCR; Sanger sequencing; Amino acid mutations; ACE2 RBD; N-terminal domain (NTD)
Online: 2 November 2021 (10:40:46 CET)
ARTICLE
|
doi:10.20944/preprints202409.1258.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
sanger sequencing; spirochetemia; early localized Lyme disease; FlaB paralogs; SNP in FlaB gene; single Borrelia burgdorferi cell; platelet-rich plasma
Online: 17 September 2024 (08:10:09 CEST)
ARTICLE
|
doi:10.20944/preprints202307.1155.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
miRNA; piRNA; mRNA; CA125; progesterone receptor (PGR); new-generation sequencing (NGS); quantitative RT-PCR; serous ovarian carcinoma; borderline cystadenoma; benign cystadenoma; formalin-fixed paraffin-embedded (FFPE) blocks; blood plasma; cytoreduction
Online: 18 July 2023 (09:58:12 CEST)
ARTICLE
|
doi:10.20944/preprints202307.1891.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
bioinformatics 1; hypervariable region 2; mitochondrial DNA 3; mitochondrial genomics 4; mitochondrial haplogroup 5; molecular anthropology 6; next generation sequencing 7; oncogenetics 8; phylogeography 9
Online: 27 July 2023 (09:29:37 CEST)
ARTICLE
|
doi:10.20944/preprints202007.0639.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
chromatin immunoprecipitation with massively parallel sequencing, transcription factors binding sites prediction; cooperative binding of transcription factors; composite elements; motifs conservation; classification of transcription factors; ETS transcription factor family; direct binding of transcription factors; overlap of motifs
Online: 20 August 2020 (13:43:09 CEST)
REVIEW
|
doi:10.20944/preprints202201.0366.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
cell-free DNA; liquid biopsy; cancer; next-generation sequencing (NGS); minimal residual disease; measurable residual disease; molecular residual disease (MRD); leukemia; lymphoma; myeloma; myeloproliferative neoplasms; myelodysplastic syndrome
Online: 25 January 2022 (08:13:24 CET)
ARTICLE
|
doi:10.20944/preprints201807.0397.v2
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
flax; genome-wide association study (GWAS); selective sweep; genotyping by sequencing (GBS); bi-parental population; single nucleotide polymorphism (SNP); seed yield; plant height; maturity; fatty acid composition
Online: 3 August 2018 (15:34:24 CEST)