Any quantization maps linearly functions on a phase space to symmetric operators in a Hilbert space. Covariant integral quantization combines operator-valued measure with symmetry group of the phase space. Covariant means that the quantization map intertwines classical (geometric operation) and quantum (unitary transformations) symmetries. Integral means that we use all ressources of integral calculus, in order to implement the method when we apply it to singular functions, or distributions, for which the integral calculus is an essential ingredient. In this paper we emphasize the deep connection between Fourier transform and covariant integral quantization when the Weyl-Heisenberg and affine groups are involved. We show with our generalisations of the Wigner-Weyl transform that many properties of the Weyl integral quantization, commonly viewed as optimal, are actually shared by a large family of integral quantizations.