2.1. Reagents and Instruments
Iron(III) acetylacetonate [Fe(acac)3; Fe(C5H7O2)3; 97%], decanoic acid [CH3(CH2)8COOH; 98%], benzyl ether [(C6H5CH2)2O; 98%], tetraethyl orthosilicate [TEOS; (C2H5O)4Si; for synthesis], potassium methylate (CH3OK; for synthesis), anhydrous methanol (CH3OH; 99.8%), glycidol (C3H6O2; 96%), ethylenediamine (NH2CH2CH2NH2; absolute, ≥99.5%), sodium cyanoborohydride (NaBH3CN; reagent grade, 95%), N-ethyl-N′-(3-dimethylaminopropyl)carbodiimide hydrochloride [E.D.C.; C8H17N3 hydrochloric acid (HCl) Bio extra], N-hydroxy succinimide (C4H5NO3; 98%), 3-(4,5-dimethylthiazol-2-yl)-2–5-diphenyltetrazolium bromide (MTT; 98%), dimethyl sulfoxide (DMSO), and trifluoroacetic acid [TFA; CF3COOH; high-performance liquid chromatography (HPLC), 99%] were obtained from Sigma-Aldrich (Taufkirchen, Germany). Acetonitrile (HPLC grade) was purchased from Carlo Erba Reagents (Barcelona, Spain). Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum (FBS), penicillin/streptomycin solution, RPMI-1640, L-glutamine, trypsin-EDTA, nonessential amino acids, sodium pyruvate, and phosphate-buffered saline (PBS) were acquired from Biowest (Nuaillé, France). Muse® Annexin V & Dead Cell Kit and Instrument Cleaning Fluid were purchased from Luminex (Northbrook, IL, USA). HCl (37%), phosphoric acid, and sodium hydroxide were supplied by Merck KGaA (Darmstadt, Germany). Deionized water was processed in a Milli-Q water purification system.
PC-3 [PSMA (-) human prostate derived from the metastatic part of the bone], LNCaP [PSMA (+) prostate derived from the metastatic site left supraclavicular lymph node] cells were supplied by the American Type Culture Collection (ATCC; Manassas, VA, USA). These cells were obtained from the ATCC using the authors’ previous project resources for academic studies in the cell culture laboratory of the Ege University Institute of Nuclear Sciences.
Hydrochloric acid 35-38%, analytical pure, Chempur, Poland; Ammonium Acetate, analytical pure, Chempur, Poland; Ammonia solution 25%, analytical pure, Chempur, Poland; Human serum, Sigma-Aldrich, USA; Dulbecco’s PBS, Biological Industries, Israel; Calcium Carbonate 4,3% 46Ca, Isoflex, USA; Calcium Carbonate, 99,999%, Alfa Aesar, USA; Syringe filter 0.2 μm, PTFE Whatman, Great Britain; Cation exchange resin Dowex 50WX4, mesh 100-200, H+, Fluka Analytical, USA
Following materials were used: growing medias – DMEM (PC-3) and RPMI 1640 (LNCaP); Trypsin EDTA solution C; water, cell culture grade; phosphate-buffered saline (PBS) and fetal calf serum from Biological Industries (Beth Haemek, Israel). For cytotoxicity evaluation, CellTiter96® AQueous One Solution Reagent (MTS compound) from Promega (Mannheim, Germany) was used. LNCaP and PC-3 cells were obtained from the American Type Tissue Culture Collection (ATCC, Rockville, MD, USA) and cultured accordingly to the ATCC protocol. For experimental applications, over 80% confluent cells were used. Blocking the PSMA receptors was accomplished with PSMA-617, obtained from Selleck Chemicals L.L.C., Houston, TX USA.
The following equipment was used: HPLC SPD-10AV ultraviolet-visible (UV-vis) and AD2 detector systems with an LC-10Atvp pump (Shimadzu, Kyoto, Japan), Inertsil ODS-3 C-18 4.6 250 mm HPLC 5 µm column (G.L. Sciences, Inc., Tokyo, Japan), SIL-20A HT automatic sampler (Shimadzu), Varioskan Flash multimode microplate reader (Thermo Fisher Scientific, Darmstadt, Germany), AR-2000 radioTLC (thin-layer radiochromatography) imaging scanner (Eckert & Ziegler, Berlin, Germany), Packard Tricorb-1200 liquid scintillation counter (Meriden, CT, USA), Malvern Zetasizer Nano ZS dynamic light scattering (D.L.S.; Malvern Panalytical, Malvern, U.K.), Millipore Muse Dead Cell Analyzer Flow Cytometry inverted microscope (Leica Microsystems, Wetzlar, Germany), and Spectrum Two I.R. spectrophotometer (attenuated total reflection; Perkin-Elmer, Boston, MA, USA). The Ege University Central Research Laboratory was supplied for the below analyses:
X-ray photoelectron spectroscopy (XPS) analysis was done with the K-Alpha XPS System (Thermo Fisher Scientific, U.K.). The scanning probe microscopy (S.P.M.) image was taken by a Bruker Dimension Edge with ScanAsyst System (Billerica, MA, USA). Scanning electron microscopy (SEM) images were taken with the Thermo Scientific Apreo S device at the Ege University Central Research Laboratory and the SEM Zeiss EVO LS10 (Carl Zeiss Microscopy GmbH, Germany) at the Konya Selçuk University Advanced Research Center (Iltek). 1H-NMR, 13C-NMR and 31P-NMR spectra of DPAPA were performed with the 400 MHz operating frequency liquid MERCURY plus-AS 400 model NMR spectrometer in the Nuclear Magnetic Resonance Laboratory of Ege University Faculty of Science. Transmission electron microscopy (TEM) measurements were made with a JEOL-2100 Multipurpose 200 kV TEM (Tokyo, Japan) at the Advanced Research and Application Centre of Konya Selçuk University (Konya, Turkey). Vibrating sample magnetometer (V.S.M.) measurements were done at the Dokuz Eylül University Centre for Fabrication and Application of Electronic Materials using Dexing Magnet VSM 550 devices, ICP-MS analyses were performed the Agilent Technologies 7800 Series device, C.A., United States in Izmir Katip Çelebi University Central Research Laboratory (MERLAB).
2.9. In Vitro Studies
PC-3 (PSMA-) prostate cancer cell line, LNCaP (PSMA+) Prostate cancer cell line was used for cell culture studies. These cells were obtained from the American Type Culture Collection (ATCC) (USA) using our previous project resources for academic studies at Ege University Institute of Nuclear Sciences Cell culture laboratory. PC-3 was grown in medium consisting of Dulbecco's Modified Eagle's- Medium (DMEM) and 10% fetal bovine serum (FBS). LNCaP was grown in medium consisting of Roswell Park Memorial Institute RPMI-1640 Medium and 10% fetal bovine serum (FBS). Cells were incubated in 5% CO2 and 37°C. The medium was changed every 2 days and fresh medium was added. After the cells proliferated to cover 80% of the flasks, they were separated from the flask with 0.25% (W/V) trypsin-EDTA solution and planted in 96-well plates for cytotoxicity studies. Cells that will not be used in the study were placed in media containing 5% DMSO, first frozen at below 80°C, then stored in liquid nitrogen at below 198°C and stockpiled for further studies and possible risks. All cell culture studies were performed in 6 replicates (n=6).
2.9.1. Cell Binding of 44Sc Labeled Bioconjugates
44Sc:Receptor binding affinity of synthesized bioconjugates was performed with LNCaP cells overexpressing PSMA receptors as well as, with PC-3 cells (PSMA-negative) used as control. Two days before the experiment, cells (8 x 105 LNCaP and 5 x 105 PC-3 cells, respectively) were seeded into six-well plates and incubated in 37°C with 5% CO2 atmosphere. Subsequently, prior tested compounds were added, the cells were washed once with PBS. Next, one mL of various concentrations (0.06 – 2.0 nM) of bioconjugates labeled with 44Sc (25-30 MBq) suspended in a growing medium were added and incubated for 2 h with slight shaking. Further, the medium was aspirated, and cells were rinsed with PBS twice to remove unbound fraction. In the last step, the cells (bound fraction) were lysed twice with 1M NaOH, and all fractions were measured by Wizard2 Detector Gamma Counter (Perkin Elmer, Waltham, MA, USA). For evaluation of nonspecific binding, PSMA receptors were blocked with 2000-molar excess of non-conjugated PSMA. To calculate the specific binding, difference between total and nonspecific binding was quantified. Presented results (mean with SD) contain the data from two individual experiments, wherein each sample was repeated twice.
2.9.2. MTT Assay
Cytotoxicity tests were performed using the MTT (3-[4,5-dimethylthiazol-2-yl]-2,5 diphenyl tetrazolium bromide) method. The MTT test is based on the conversion of MTT into formazan crystals by living cells, which determines mitochondrial activity [
18]. Because total mitochondrial activity correlates with the number of viable cells for most cell populations, this assay is widely used to measure the
in vitro cytotoxic effects of drugs on cell lines or primary patient cells. Cells were prepared from cell suspensions at 5 x 10
4 cells/mL per well of 96-well plates. 100 µL of cell suspension was added to each well created, and a solution containing the sterile substance at six different (1, 3, 10, 30, 100 and 300 µg/mL) concentrations was added to the wells except the control. Cell and the reagent-free medium were used as a negative control. In the study, each parameter was studied with n=5 repetitions. The plate with the cells was incubated at 37°C in 5% CO
2. At the 24
th, 48
th and 72
nd hours of the incubation of the cells (PC-3, LNCaP), 10 µL of MTT solution was added to each well and incubated for 4 hours. Next, after 4 hours of incubation, instead of removing MTT, 100 µL of S.D.S. (sodium dodecyl sulfate) was added and incubated at 37°C for 24 hours in a 5% CO
2 environment. Cells were read using a spectrophotometer for the absorbance value of each well at a wavelength of 540 nm and a reference range of 690 nm.
2.9.3. MTS Assay
Cytotoxicity studies with
47Sc were performed with MTS assay according to the previously reported protocol [
5]. LNCaP (10 x 10
3) and PC-3 (7.5 x 10
3) cells were seeded into 96-well plates 48 h before treatment and incubated in 37°C with 5% CO
2-supplemented atmosphere. Subsequently, the media was replaced with tested compounds labeled with
47Sc and suspended in a growing medium. Cells were incubated with nanoparticles for 48 h and 72 h. Following incubation, media was removed, and fresh media was added. Finally, 20 µL of CellTiter96®AQueous One Solution Reagent (Promega, MDN, USA) was added for 2h incubation. Absorbance was measured at 490 nm to calculate the % of metabolically active cells. IC50 was calculated with using GraphPad Prism v.8 Software (GraphPad Software, San Diego, CA, USA).
2.9.4. 3D Cell Culture Studies
“Hanging Drop Model" was used for 3D cell culture using with LNCaP (PSMA+) Prostate cancer cell line and PC-3 (PSMA-) prostate cancer cell line. LNCaP is amplified in a medium consisting of Roswell Park Memorial Institute RPMI-1640 Medium and 10% fetal bovine serum (FBS), while PC-3 is derived from Dulbecco′s Modified Eagle′s- Medium (DMEM) and 10% fetal bovine serum (FBS). Cells were incubated in 5% CO2 and 37oC. The medium was changed every 2 days, and fresh medium was added. After the cells have proliferated to cover 80% of the flasks, they are separated from the flask with 0.25% (W/V) trypsin-EDTA solution, and the confluent cell lines are first removed from the surface for 3D cell culture. After being removed and taken into the relevant medium, the total droplet volume was prepared as 50 µL and 50,000 cells, and 3D cell culture models were created in the "hanging drop plate". The media of the drops containing the cell population were changed every day and spheroid formation was completed at the end of the 48th hour. After the spheroid was formed, fixation was performed to obtain a 3D cell image.
The formed spheroids were transferred into the chamber slide through the relevant medium. Then it was washed with 200 µL of PBS, 200 µL of paraformaldehyde was added and incubated at 4oC for 30 minutes. At the end of the incubation, three washes were performed with 200 µL of PBS at 5-minute incubation intervals. Then, 200 µL of triton-100 was added to the cell lines and incubated for 30 minutes at room temperature. After this stage, 100 µL (29 µg) of DPAPA NC, PSMA-DPAPA NCs; 100 µL (4.5 µg) of EDTMP NC and PSMA-EDTMP NCs were added separately for each cell line chamber and the cells were incubated for 2 hours in 5% CO2 and 37°C. After 2 hours, the applied substances were removed from the medium and washed 3 times with PBS, and finally, 2 µL/mL DAPI was added, and the related cell images were taken using a fluorescent microscope with a fluorescent microscope (Olympus BX53) 10X green filter. At the same time, cell images were taken using the "Confocal Microscopy 3D Fluorescent Imaging (Zeiss LSM880, Cambridge, United Kingdom)".
2.9.5. MRI Imaging of PC-3 and LNCaP Cells with Nanoconjugates
MR Imaging of PC-3 and LNCaP cells incorporated with C-Fe3O4 nanoconjugates were taken at T2 phase using Siemens Verio 3T MRI Scanner (GmbH, Ettlingen, Germany) equipped with 640 mT/m ID 115 mm gradient. Nanoparticles and nanoconjugates encoded with 1, 2, 3, 4* were added to LNCaP (PSMA+) prostate cancer cell line, PC-3 (PSMA-) prostate cancer cell line, respectively.