1. Introduction
Trans-2-decenoic acid is a medium-chain fatty acid with ten carbon atoms and an unsaturated double bond at the α and β carbon positions. Its molecular formula is C
10H
18O
2, and its relative molecular mass is 170.25. The specific structural formulas are shown in
Figure 1. As an essential and uniquely structured medium-chain α, β-unsaturated fatty acid, trans-2-decenoic acid has a wide range of applications, so it is essential to explore its synthesis method. The most common way to produce α, β-unsaturated fatty acid is through chemical synthesis. Chemical methods include dehydrogenating established carbonyl compounds [
1], aldol condensation [
2], and Wittig-type [
3] reactions. However, when using various raw materials to synthesize target substances through chemical synthesis, there are common shortcomings, such as serious environmental pollution, low reaction controllability, and a low safety guarantee factor. Therefore, compared with traditional methods, the biocatalytic synthesis of target substances has attracted widespread attention because of its advantages, such as high safety, strong specificity, and low environmental pollution [
4].
α, β-unsaturated fatty acids generally have an aromatic smell and are primarily found in some animal fats [
5] and some plant fruits. In the biosynthesis of royal jelly acid (10-hydroxy-2-decenoic, 10-HDA), trans-2-decenoic acid can be used as a precursor for the biosynthesis of 10-HDA [
6]. As a key factor in royal jelly, 10-HDA plays a role in antibacterial activity [
7,
8], cancer prevention and treatment, and immunity regulation [
9]. The biosynthesis of trans-2-decenoic acid provides a basis for future biosynthetic pathways of 10-HDA. Trans-2-decenoic acid can also be used as a ligand to synthesize anisotropic nanocrystalline materials. Lu et al [
9] and others confirmed that using organic carboxylic acid ligands plays an essential role in the size and morphology of the synthesized one-dimensional structured nanocrystals, and only when trans-2-decenoic acid is used as the ligand does crystal growth become quicker, producing elongated nanocrystals.
Whether a substance is antibacterial is usually closely related to the special functional groups, chain length, and substituent group position [
10,
11]. Usually, the special functional groups, chain length, and substituent group position determine whether it is bacteriostatic; Marques et al. [
12] reported that 2-decenoic acid is responsible for induction in a series of Gram-negative and Gram-positive bacteria and yeast. The dispersion of natural biofilms increases microbial metabolic activity, significantly enhancing the bactericidal effects of conventional antibacterial drugs. Cai et al. [
13] reported that trans-2-decenoic acid plays a vital role in inducing the disintegration of aerobic particles. After adding trans-2-decenoic acid, the surfaces of aerobic particles, bacteria, and extracellular polymers are stripped away. Therefore, trans-2-decenoic acid is widely used in medicine.
The biosynthesis of fatty acids has gradually become a research hotspot [
14]. Liu et al. synthesized crotonic acid through the fatty acid biosynthesis pathway in
E. coli strains using a specific thioesterase
(bTE) derived from
Bacteroides thetaiotaomicron to catalyze the hydrolysis of crotonyl-ACP to synthesize crotonyl-ACP butyric acid [
15]. However, there are few reports on the biocatalytic synthesis of trans-2-decenoic acid. The first report on the biocatalytic synthesis of decenoic acid was on the metabolic pathway of biosynthesis of crotonic acid by modifying the β-oxidation pathway; 2-decenoic acid is a by-product of its metabolic pathway, and only trace amounts of 2-decenoic acid can be detected in the by-products, with a yield of only 9.45 mg/L. However, the successful synthesis of 2-decenoic acid has laid an important foundation for microbial production of α, β-unsaturated fatty acids [
16,
17].
The biocatalytic synthesis of trans-2-decenoic acid relies on the β-oxidative decarboxylation process of fatty acids [
18,
19]. As shown in
Figure 2, the β-oxidation pathway was modified in
E. coli in the early stage of the laboratory, relying on fatty acyl-CoA synthase
FadD, fatty acyl-CoA dehydrogenase FadE, and fatty acyl-CoA thioesterase
YdiI to achieve the addition of double bonds and knocking. In addition to the genes encoding enoyl-CoA synthase
FadB and the protein operon FadR [
20], they inhibit the consumption of the intermediate product branch, thereby catalyzing the synthesis of trans-2-decenoic acid from decanoic acid [
6,
21]. Based on this metabolic process,
FadD (MaMACS) from
Mycobacterium avium was screened to activate the substrate decanoic acid because it has the highest activity on decanoic acid compared to caprylic acid or dodecanoic acid and longer chain fatty acids [
22], so it was selected to connect CoA to the saturated fatty acid decanoic acid; the fatty acyl-CoA dehydrogenase (PpFadE) from
Pseudomonas putida KT2440 was screened. PpFadE has broad substrate specificity; fatty acyl CoA with a chain length of 14 carbon atoms is more preferred [
23], catalyzing the dehydrogenation of decanoyl-CoA to generate trans-2-decenoyl-CoA [
24]; lipids from
Cronobacter turicensis were screened for acyl-CoA thioesterase (CtYdiI) due to its higher catalytic ability for mid-chain trans-2-decenoyl, achieving higher efficiency in hydrolysing CoA in trans-2-decenoyl-CoA, obtaining trans-2-decenoic acid [
25,
26].
Owing to the extensive role of trans-2-decenoic acid in medicine, food, health care, etc., the industrial production of trans-2-decenoic acid has become particularly important. Although microbial fermentation has been widely researched and applied in recent years, owing to its low cost and ease of operation, there have been few studies on medium-chain unsaturated fatty acids [
27]. Therefore, we selected the engineering strain
(E. coli BL21(DE3)-△fadB-△fadJ-△fadR/pET28a-sumo-CtydiI/pCDFDuet-1-MaMACS-PpfadE) that was constructed and saved in the laboratory in the early stage to design a reasonable fermentation method. The culture medium and conditions were optimized to increase the yield and achieve the goal of high industrial production of trans-2-decenoic acid.
The response surface method (RSM) was used to obtain the optimal parameters of complex systems by establishing mathematical models, regression analysis, and variance analysis [
28,
29]. It can optimize submerged fermentation media and culture conditions [
30,
31]. The statistical model based on the Box–Behnken design (BBD) is a response surface design method [
32]. To optimize the fermentation medium and conditions, we used the BBD to explore the effects of different nutrients, such as the substrate dissolution method, substrate flow amount, carbon source, and metal ions, on the synthesis of trans-2-decenoic acid. Through preliminary screening of single-factor experiments, the key factors affecting fermentation were selected, and a fed-batch fermentation experiment was conducted in a 1 L fermentation tank, efficiently increasing the fermentation yield of trans-2-decenoic acid.
4. Discussion
Based on the E. coli BL21(DE3)-△fadB-△fadJ-△fadR/pET28a-sumo-CtydiI/pCDFDuet-1-MaMACS-PpfadE) designed by the previous research group, we used the biological fermentation method for the first time to catalyze the synthesis of trans-2-decenoic acid from decanoic acid. The reaction system was put into a fermentation tank for amplification. Based on the aerobic characteristics of E. coli, better ventilation and stirring of the fermentation tank were used to improve the reaction system. Efficient reactions were performed. In the experiment, the purpose of controlling the substrate concentration at 0.5 g/L and 1% inoculum volume was to enable the bacteria to grow better in the system and maintain a relatively strong metabolic activity for better biocatalytic reactions.
For reaction optimization, we conducted eight single-factor experiments: seed culture temperature, seed liquid culture time, inoculum amount, induction temperature, solvent type, feed concentration, inducer concentration, and metal compound type. Based on the influence of different factors on the production of trans-2-decenoic acid, the three factors with the greatest influence on trans-2-decenoic acid were determined as the response variables: feed, inducer, and MnCl
2 concentrations. The BBD was used to optimize the fermentation conditions. These three factors have different effects on trans-2-decenoic acid. According to the order of significance, they can be arranged as fed concentration > inducer concentration > MnCl
2; after optimizing each factor, the predicted value of the optimal fermentation conditions was 1.9 g/L, the fed concentration was 0.14 g/L, the inducer concentration was 5.63 g/L, and the MnCl
2 concentration was 0.11 mM. We conducted three repeated experiments based on the optimized optimal conditions and found that the yield of trans-2-decenoic acid was 1.982 ± 0.110 g/L, which was 1.042 g/L higher than the production of LB medium before optimization. With a substrate concentration of 0.5 g/L, the yield was 0.479 g/L higher than the average yield achieved by Li et al. [
40]It increased by 1.503 ± 0.110 g/L. Evidently, the fermentation condition optimization plan we carried out had a significant effect.
During the catalytic reaction of engineered
E. coli, the
fadD gene encodes acyl-CoA synthase, which has broad substrate specificity and catalyzes the conversion of free fatty acids into highly metabolically active coenzyme A thioesters. Through the action of CoA synthase, free fatty acids form fatty acyl-CoAs with high metabolic activity [
41,
42,
43]. Subsequently,
FadE catalyzes the oxidation of acyl-CoA to trans-2-enoyl CoA [
44] and finally removes CoA to form α, β-unsaturated fatty acids through the catalysis of acyl-CoA thioesterase
YdiI. Therefore, the three enzymes
FadD,
FadE, and
YdiI play vital roles in this reaction process. While optimizing the fermentation conditions, we explored the changes in the expression levels of the three enzymes before and after fermentation. The bands in the optimized samples were more apparent than those in the unoptimized samples, further confirming the necessity of optimizing the fermentation conditions.
One problem that arose during fermentation was that the amount of trans-2-decenoic acid did not increase regularly or stably. In the early stages of the reaction, the level of trans-2-decenoic acid gradually grew. As the reaction continued, the amounts of the products and substrates gradually decreased or even disappeared, as confirmed through many repeated experiments. We speculate that this is due to the continuous growth and metabolism of the bacteria during the reaction process, which required a large amount of nutrients, including carbon sources. Various substances, such as nitrogen sources and biotin, are gradually consumed or even exhausted as the bacterial cells grow, resulting in the culture medium being unable to provide sufficient nutrients to the bacterial cells. Therefore, we suspected that bacterial cells were preferentially consumed at this stage. The substrates and products were used as carbon sources to ensure growth and metabolic activity. For this phenomenon, we need to formulate a more accurate and efficient plan for the next step by adding nutrients and energy during the reaction process to maintain a stable biological reaction while also considering that long-term fermentation leads to bacterial aging. The aging of bacterial cells decreases enzyme production owing to a decline in metabolic capacity. Therefore, we believe that after the reaction has been carried out for a certain period, new culture media must be added to dilute the bacterial cells so that more new bacterial cells can grow to ensure reaction success.
Due to the various drawbacks of the chemical synthesis of α, β-unsaturated fatty acids currently on the market, attention to their biosynthesis has gradually increased and has developed into an alternative to traditional chemical methods. There have been few previous studies on trans-2-decenoic acid, strongly limiting the current research on this substance. This limitation is reflected in the instability during the fermentation process and the low conversion rate and yield; how to produce it efficiently and even industrially mass produce it remains difficult. At present, the synthesis of trans-2-decenoic acid relies mainly on chemical synthesis; however, this method involves a long process, has low reaction controllability, and can easily cause environmental pollution. Therefore, exploring biosynthetic methods with the advantages of high safety, strong specificity, and low environmental pollution to catalyze the synthesis of trans-2-decenoic acid has become a research hotspot. This study improved the production of trans-2-decenoic acid by improving the metabolic pathway of trans-2-decenoic acid modified by a previous research group and by improving the limiting factors in the whole-cell catalysis process. Compared with whole-cell catalysis, the production indeed improved, which provides a basis for the future synthesis of trans-2-decenoic acid catalyzed by growing cells.