2.7. Structural analysis of SJG-1.0 and GMG-1.0 by NMR spectroscopy
The detailed structural features of SJG-1.0 and GMG-1.0 were further elucidated by 1D/2D NMR analyses. First, some structural information obtained from above physicochemical analyses can be further confirmed by the
1H and
13C NMR spectra (
Figure 2 and
Figure 3). According to the literature [
28], the relatively downfield chemical shifts (>4.8 ppm) of the anomeric signals suggested the α configuration of residues A–C. Relatively upfield chemical shifts (<4.7 ppm) of the anomeric proton signals indicated β configuration of residues D–I. The signals (5.27, 5.18, and 4.86 ppm) in the anomeric region may be from α-
d-IdoA residues, while the anomeric singal of 4.47 ppm may be due to β-
d-GlcA residues according to literature [
29]. In addition, the anomeric protons at δ 4.67, 4.62, 4.61, 4.56, and 4.53 ppm may be attributed to the β-
d-GalNAc residues. The intense signals with upfield resonance appeared at around 2.03-2.07 ppm may be due to the acetyl methyl groups in the amino sugars, such as GlcNAc and GalNAc residues in these GAGs. The amino sugar residues D–H were almost acetylated according to their peak area integration of the anomeric proton and the methyl from the acetyl groups. In the
13C spectra, the most downfield resonance, δ
H at 176–178 ppm, can be ascribed to two carbonyl groups in IdoA, GlcA, GlcNAc and GalNAc residues. The anomeric carbon signals were at 103–107 ppm. The relative upfield signals appearing at approximately 55 ppm can be arbitrarily assigned as C-2 resonance of GlcNAc and GalNAc residues because of the presence of the amino group at this position. The most upfield signals at approximately 25 ppm may be attributed to the acetyl methyl groups in the GlcNAc and GalNAc residues. Subsequently, the 2D NMR spectra (
1H–
1H COSY, TOCSY, ROESY,
1H–
13C HSQC, HSQC-TOCSY, and HMBC) (
Figure 4 and
Figures S4–S6) were applied to assign all the chemical shifts of various residues compared with the data available in the literature [
30,
31]. The assignment results are shown in
Table 1.
SJG-1.0 showed nine intra-residue spin coupling systems in
1H–
1H COSY, TOCSY, and ROESY spectra (
Figure 4A–C), indicating that it contained nine kinds of sugar residues linked to various sugar residues. The obvious signals at 5.27/103.6, 5.18/103.9, 4.86/106.3, 4.67/105.1, 4.62/105.0, 4.61/105.0, 4.56/103.8, 4.53/105.6, and 4.47/106.7 ppm in the HSQC spectrum were assigned to the anomeric signals of various sugar residues designated as A, B, C, D, E, F, G, H, and I, respectively (
Figure 4E). The cross-signals at 4.05/54.3, 4.08/54.7, 4.10/54.3, 4.02/54.5, and 3.86/55.1 ppm in the HSQC spectrum can be readily assigned to H-2/C-2 of the D–H residues, which indicated that they were β-
d-GalNAc or β-
d-GalN residues. Chemical shifts of H-2 of A–I can be readily obtained from the COSY spectrum, and their C-2 chemical shifts can be assigned by the HSQC spectrum. The residues A, B, C, and I were then identified to the α-
d-IdoA or β-
d-GlcA residues because they had a relatively large C-2 signal compared with the amino sugar. The proton signals of the nine systems from H-3 to H-6 can be also assigned carefully using the
1H–
1H COSY, TOCSY and ROESY spectra although some signals in these spectra were weak. The downfield chemical shift of H-5 of residues A–C (δ
H > 4.7 ppm) further confirmed that they were
d-IdoA residues for their C-5 epimerization [
30]. Then, the residue I was confirmed to be the
d-GlcA residue. The detailed carbon signals of various sugar residues from C-3 to C-6 were assigned based on the assignment of the protons, using the
1H–
13C HSQC and HSQC-TOCSY spectra (
Figure 4E and
Figure S4). Therefore, all signals from the 1D/2D NMR spectra can be clearly assigned as shown in
Table 1.
The sequence of sugar residues in SJG-1.0 was confirmed by the
1H–
1H ROESY and
1H–
13C HMBC NMR spectra (
Figure 4C and D). For example, the cross signal (4.86, 4.03 ppm) in the ROESY spectrum showed that the residue C had a strong inter-residue ROE connected to H-3 of residue D, confirming that residue C was linked to the C-3 position of residue D. The cross signal (4.67,4.08 ppm) indicated that residue D was linked to the C-4 position of residue C. Similarly, the linkages (I-β1,3-F/G/H), (E/G/H-β1,4-I), (A-α1,3-E), (B-α1,3-G), (F-β1,4-A/B) were confirmed by the cross peaks at (4.47, 4.00 ppm), (4.62/4.56/4.53, 3.78 ppm), (5.27,4.14 ppm), (5.17,3.96 ppm), and (4.61, 4.10/4.13 ppm) in the ROESY spectrum. The β1,3-linkages between residue I and residues F/G/H were further confirmed by the correlation signals (4.47, 78.6 ppm) in the HMBC spectrum. The cross signals (3.78, 103.8 ppm) further confirmed the β1,4-linkages between residue G and residue I.
The down-field chemical shifts of protons and carbons caused by the sulfation can identify the sulfated positions on residues A–I in comparison with the corresponding unsubstituted monosaccharide. Compared with the H/C-4 chemical shifts (4.21/70.3, 4.17/70.3 ppm) of residues G and H, the downfield H/C-4 chemical shifts (4.66/79.2, 4.63/79.1, 4.74/79.4 ppm) of residues D, E, and F indicated that these positions were sulfated. Furthermore, the downfield chemical shift of H/C-6 (4.17/4.25, 70.0 ppm) confirmed that residue F was sulfated at the C-6 position. Similarly, the downfield H/C-2 chemical shifts (3.83/79.1, 3.79/79.2 ppm) of residues A and B were obviously higher than the corresponding chemical shift (3.53/72.4 ppm) of residue C, indicating that C-2 positions of residues A and B were sulfated.
Based on the above analysis, the proposed polysaccharide sequence of SJG-1.0 was -{-C-α1,3-D-β1,4-}
m-{-A-α1,3-E-β1,4-}
n-{-I-β1,3-H-β1,4-}
o-{-I-β1,3-F-β1,4-}
p-{-B-α1,3-G-β1,4-}
q-{-I-β1,3-G-β1,4-}
r. According to the integral area of the anomeric proton of amino sugars in the
1H spectrum (
Figure 2A), the proportion of various disaccharide units in the SJG-1.0 can be calculated to be m:n:o:p:q:r = 26:6:2:2:1:9.
Based on the above results of NMR analysis of SJG-1.0, the detailed chemical structure of GMG-1.0 was also further confirmed by its 1D/2D NMR analysis (
Figure 4F,
Figures S5 and S6). The
1H and
13C NMR spectra and the chemical shifts from identified 2D NMR spectra are shown in
Figure 2B, 3B and
Table S1. It was observed that most signals from the same residues of GMG-1.0 were similar to those of SJG-1.0. GMP-1.0 was proposed to have a similar polysaccharide sequence to SJG-1.0, except that the GMP-1.0 had a obviously different disaccharide proportion of m:n:o:p:q:r = 69.5:6:3:3.5:1:1 and contained higher content of disaccharide unit -{-GlcA-β1,3-GalN
4S6S-β1,4-}-. These results indicated that both SJP-1.0 and GMG-1.0 were rich in DS domain, i.e., they were mainly composed of repeating disaccharide units of -{IdoA-α1,3-GalNAc
4S-β1,4-}-. However, the proportions of various disaccharide units in these two GAGs were obviously different, which may be due to the different species.
Based on the results of monosaccharide, disaccharide composition, and NMR analyses, SJG-1.0 and GMG-1.0 were confirmed to be CS/DS hybrid chains with high amounts of DS-A disaccharide unit. Since some disaccharide units are extremely low in these CS/DS chains, especially in the GMG-1.0, having low resolution of the ROESY and HMBC spectra, their precise structure of these GAGs may be elucidated by analyzing their oligosaccharide fragments as carried out in our previous studies [
9,
32].
DS often occurs in co-polymeric form with CS, thus forming a CS/DS hybrid chain. To date, many CS/DS hybrid chains with varying proportions of CS and DS disaccharide units have been isolated from marine animals, such as shark skin and brittlestars [
33,
34]. These hybrid chains from different species of marine animals displayed enormous structural diversity mainly due to the variability of sulfate substitution, and showed multiple biological activities, such as neuritogenic activity, wound healing, and anticoagulant activity, which had potential as therapeutic agents [
33,
34,
35]. In 2017, GAGs from fish swim bladder were determined to contain 95% CS of the total GAG [
21]. Considering that the CS may contain CS-B (DS) unit, it was probably a CS/DS hybrid chain. The integration of the peak area for 1H–IdoA and 1H–GlcA in the
1H NMR spectrum suggested that the ratio of DS disaccharide unit to CS-A disaccharide unit was 1:1.4. In our present studies, the CS/DS hybrid chains SJG-1.0 and GMG-1.0 are mainly composed of DS-A disaccharide unit and a small amount of DS-B and CS disaccharide units. Therefore, the structures of SJG-1.0 and GMG-1.0 are obviously different from those of the CS/DS hybrid chains in previous reports [
19,
21].