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A peer-reviewed article of this preprint also exists.
This version is not peer-reviewed
Preprints on COVID-19 and SARS-CoV-2
Submitted:
18 November 2023
Posted:
23 November 2023
You are already at the latest version
MDSC | Myeloid derived suppressor cells |
ACE2 | Angiotensin-converting enzyme 2 |
Arg-1 | Arginase-1 |
ASC | Alanine-serine-cysteine |
CMP | Common myeloid progenitor |
CSF | Colony-stimulating factor |
DAMP | Damage associated molecular pattern |
GM-CSF | Granulocyte-macrophage colony-stimulating factor |
H2O2 | Hydrogen peroxide |
HSC | Hematopoietic stem cells |
LOX1 | Lectin-type oxidized LDL receptor 1 |
M-CSF | Macrophage colony-stimulating factor |
M-MDSC | Monocytic MDSC |
PD-1 | Programmed cell death protein 1 |
PD-L1 | Programmed death ligand 1 |
PMN-MDSC | Polymorphonuclear mdscs |
ROS | Reactive oxygen species |
SLC7A11 | Solute carrier family 7 member 11 |
Syk | Spleen tyrosine kinase |
Treg | Regulatory T cells |
M- or PMN-MDSC | Gene sets used/signature genes identified | Reference |
---|---|---|
M-MDSC | S100A8, S100A12, LGALS1, VCAN, RETN, LYZ, PLAC8, MNDA, CTSD, SELL, STXBP2, CYP1B1, VIM, CLU, NKG7, ALOX5AP, NCF1, MCEMP1, TIMP1, SOD2, CD163, NAMPT, FAM65B, ACSL1, VAMP5, LILRA5, VNN2, ANXA6, IL1R2, CALR | [29] |
CSTA, IL1B, HBB, LRG1, CXCR2, PROK2, IGFBP6, HBA2, SOCS3, ASPRV1, C19orf12, GRINA, CSF3R, CCR1, IFITM2, HP, CTSD, TSPO, S100A11, JUNB, CYP4F2, CD84, CLEC4E, MAP1LC3B, GCNT2, GDA, DUSP1, HDC, C5AR1, MSRB1, SRGN, SELPLG, BTG1, MXD1, HIST1H2BI, STEAP4, SLC40A1, ARG2, SLPI, CLEC4D, TXN, FABP5, CDKN2D, UPP1, PRTN3, CHI3L1, TPD52, CXCL3, RNF149, GPCPD1, S100A6, GSR, LMNB1, TACSTD2, MTUS1, LITAF, NPL, C19orf38, SEPHS2, IL36G, GLIPR2, EIF4EBP1, F10, VCAN, PI16, SMPDL3A, GAPDH, ATP6V1G1, FCGR2A, PLA2G7, CD300LF, YPEL3, KIAA1551, ADIPOR1, UBA52, GLRX, SELL, ATG3, ABTB1, FGL2, ALOX5AP, GADD45A, CD14, SIGLEC9, FBXL5, MYD88, TGFBI, SNAP23, PILRA, FXYD5, BST1, FLOT1, LILRB4, PPT1, MRGPRX3, R3HDM4, PKM, PICALM, SORL1, ZYX, ATP11B, RGS3, CTSC, PTPN1, TALDO1, STK17B, ANKRD33B, GYG1, IL4R, IER3, NUDT4, SKAP2, IL13RA1, LILRB3, GATM, NCF4, F13A1, CDK2AP2, EMB, GCLM, RAB24, CD300LD, SERP1, CEBPB, ALDOA, UBE2H, TARM1, TSC22D3, CARHSP1, HEBP1, KLF13, RBM3, ELP1, PGD, ENO1, DHRS7, OGFRL1, GDPD3, SFXN5, PYGL, ANXA11, DCK, OSM, SDCBP, UBB, EDEM2, LDHA, UBALD2, CCRL2, FTH1, PKIB, PNPLA2, CAP1, KLF2, RND1, LCP1, ANXA2, HOPX, CAMK2D, SUPT4H1, GNG12, ARID5A, CD302, CSF2RB, PPP1R2, RAC2, SLC28A2, PIM1, MPP1, RNASEL, TONSL, SSU72, TBC1D14, ID2, SPI1, HIST1H1C, IER2, MMP8, RTP4, TMEM14C, UBE2B, GPR146, PGLYRP1, MBOAT7, LAMP2, BIN3, PLSCR1, EGR1, EMILIN2, C5orf30, TREM1, BIN2, CALM3, CBR3, SLFN12L | [30] | |
IFITM1, IFITM2, IFITM3, GRINA, HLA-DRA, HLA-DQB1, HLA-DPA1, CD74 | [31] | |
PMN-MDSC | SAMD9L, IL1RN, CSF3R, CSF1, GDA, HP, IFIT1, IFIT3, NUDT4, IFIT2, NDST1, IL18RAP, PGLYRP1, CD177, ZBP1, RSAD2, IL1R2, MCEMP1, TYROBP, SLPI, CRISPLD2, S100A6, CMPK2, PADI4, RAF1, S100A9, S100A8, SLC27A4, PFKFB4, C5AR1, FPR1, FPR2, ADIPOR1, RASGRP4, HCAR2, CD300LF, IP6K1, PAG1, CCR1, NBEAL2, ISG15, BST1, ABTB1, SELL, TREML2, TARM1, DMXL2, LCN2, FBXL5, MXD1, RTP4, TINAGL1, SLC2A3, PYGL, LYST, SLC2A6, TIMP2, FFAR2, UPP1, CD33, CERS6, SH2D3C, MMP8, MMP9, DUSP6, RHOB, IL17RA, FGR, MMP13, OAS2, IL1B, PECAM1, IRF7, CD44, TLR2, LILRA6, SLFN5, PTAFR, CXCR4, SAMHD1, THBS1, STX11, KCTD20, CXCR2, CCL3, EGLN3, GABBR1, SEMA4D, GSR, OSM, ASPRV1, KLF2, LRG1, PI16, SMAP2, AGRN, YPEL3, MSRB1, GRINA | [32] |
S100A12, ARG1, CD177, MCEMP1, and GYG1 | [33] |
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