Dose-Dependent Nematocidal Effects of Herbal Extracts: Correlation and Phenotypic Observations
To further validate the nematocidal effects, we investigated whether varying doses of herb extracts correlated with the observed phenotypes of the two herbs. As the dose of the herbal extract increased by tenfold, we observed a corresponding decrease in survivability for both herbal extracts, indicating a clear dose-dependent phenomenon (
Figure 1D). For instance, in
V.l.-A, survivability changed from 33, 25, to 17, and in
O.c.-H, it changed from 27, 23, to 18 for concentrations of 0.03, 0.3, and 3 ng/ml, respectively.
Remarkably, this dose dependency was evident across extracts obtained from three solvents (A, B, H). Similarly, the number of adults also declined with increasing herb concentrations, indicating that the herb extracts indeed impeded mitotic growth (
Figure 1D). For instance, in
V.l.-A, the number of adults shifted from 44, 41, to 35, and in
O.c.-H, it shifted from 37, 29, to 25 for concentrations of 0.03, 0.3, and 3 ng/ml, respectively.
C. elegans reproduce through self-fertilization. Errors during the separation of sex chromosomes in cell division can lead to offspring with abnormal sex chromosome compositions, resulting in an increased incidence of males, known as the HIM (High Incidence of Males) phenotype. This HIM phenotype serves as a crucial indicator for studying the impacts of these factors on sex chromosome segregation, chromosomal abnormalities, and reproductive processes (3, 12).
While we observed the induction of the HIM phenotype with all six types of herb extracts, intriguingly, we did not discern a distinct dose dependency. This suggests that defective sex chromosomal segregation was not directly correlated with the dosages of the herb extracts (
Figure 1D). For example, in
V. lobelianum-A, the HIM phenotype was observed at 7, 5.1, and 5.1, and in
O.c.-H, it was observed at 10.7, 8.9, and 4.6 for concentrations of 0.03, 0.3, and 3 ng/ml, respectively.
Herbal extracts activate DNA damage checkpoint pathways: ATM, ATR, CHK1, and apoptosis.
The DNA damage response is a signaling pathway that coordinates cellular reactions to DNA lesions, triggering a series of responses, such as DNA damage repair, apoptosis, and cell cycle arrest (18, 19). This intricate pathway is regulated by two kinases, ATM and ATR, each with distinct DNA damage specificities. Often, they collaborate to modulate downstream processes of CHK1 (
Figure 3A, (20)). ATM and ATR can both activate CHK1 either directly or indirectly through intermediate kinases. The activation of CHK1 subsequently initiates downstream events that promote DNA repair, halt cell cycle progression, and uphold genome stability in the face of DNA damage or replication stress.
The defects in DNA damage repair indicate that the herb extracts trigger the activation of the DNA damage checkpoint (
Figure 2B). To corroborate the heightened expression of DNA damage checkpoint response pathways, we assessed the levels of ATM-1 (homolog of mammalian ATM), ATL-1 (homolog of mammalian ATR), and pCHK-1 (homolog of mammalian CHK1), the active form of CHK-1. Upon exposure to
V.l., there was an increase in the expression of
atm-1 and
atl-1 (
Figure 3B), with 1.7-fold and 1.5-fold induction, respectively (P=0.0026 and P=0.0007). Similarly,
O. cornuta treatment led to elevated expression of these two pivotal DNA damage checkpoint components, signifying the activation of the DNA damage response due to herbal treatment (with a 6.4-fold induction in
atm-1 and a 4.1-fold induction in
atl-1 expression, P=0.00022 and P=0.00029, respectively).
In line with the mRNA expression profile, elevated levels of pCHK-1 foci were observed in the pachytene stage of germlines, indicating an active DNA damage response following exposure to herbal extracts (
Figure 3C, (19, 21)). The two herb extracts exhibited an induction in the PMT and/or pachytene stage, further confirming the activation of the DNA damage checkpoint and CHK-1 phosphorylation (
Figure 3C and 3D, 0.7 vs 2.5 in PMT of
V. lobelianum, P=0.0121; 0.7 vs 3.1 in PMT of
O.c., P=0.0072; 1.6 vs 7.0 in pachytene of
V. lobelianum, P=0.0004; 1.6 vs 4.1 in pachytene of
O.c., P=0.0008).
Moreover, we investigated whether the observed nematocidal phenotypes were contributed by the secondary metabolites produced by
E. coli OP50. To test this hypothesis, we fed
C. elegans with heat-killed OP50 and compared its gene expression level to that of live OP50-fed worms. No discernible differences in gene expression were observed between autoclaved and live OP50 in both herbs, indicating that the nematocidal phenotypes observed with herbal extracts were not a result of bacterial metabolism (
Figure 3B).
Since unrepaired DNA intermediates can result in apoptosis in pachytene nuclei (21, 22), we further investigated DNA damage-induced apoptosis in the germline. In comparison to the untreated control group, which rarely displayed nuclei highlighted by acridine orange staining, both
V. lobelianum and
O. cornuta treatments showed an increase in the number of acridine orange-stained nuclei during pachytene (
Figure 3E, 0.3 vs 2.0 in control and
V.I., P<0.0001; 0.3 vs 1.0 in control and
O.c., P=0.0150).
Collectively, our findings demonstrate that exposure to herbal extracts heightened the expression of key components in the ATM/ATR-dependent DNA damage checkpoint pathway and elevated levels of phosphorylated CHK-1, signifying activation of the DNA damage response. These observations strongly indicate that unrepaired DNA damage persists and triggers the DNA damage checkpoint, ultimately leading to increased apoptosis in the C. elegans germline. Altogether, the herbal extracts of V. lobelianum and O. cornuta activate the DNA damage response pathway in C. elegans, leading to an increased level of DNA damage-mediated apoptosis.
LC‒MS analysis identified anticancer compounds
Herbal extracts encompass a broad spectrum of plant chemicals. To gain insights into the specific compounds contributing to the DNA damage pathway, we conducted LC‒MS (liquid chromatography‒mass spectrometry) analysis to identify the biologically active constituents of these extracts. Our analysis of the herbal extract from
V. lobelianum and
O. cornuta unveiled the presence of more than 19 and 13 compounds, respectively. Among the major components identified were flavonoids and terpenoids (as shown in
Table 1,
Figure 4, and Additional file 1).
The types of phytochemicals were highlighted with different colors.
Common compounds identified in both extracts included luteolin-7-O-ructoside, thymol, dihydrocarvone, carvacrol acetate, methyl acetate, luteolin, 2,4,3’,5’-tetrahydroxystilbene, pilloin, linoleic acid, and homoplantain. Additionally, the extract of
V. lobelianum contained resveratrol, diosmetin, ferruginol, tilianin, vitexin, vitexin-2”-O-rhamnoside, vitexin-4”-O-glucoside, naringin, and jervine, while the extract of
O. cornuta contained sugiol, dihydrotanshinone I, aucubin, and paclitaxel. The list of detected compounds is provided in
Table 1 and Additional file 1.
V. lobelianum and the Hedgehog pathway
We hypothesized that the compounds present in the herbs may contribute to the observed phenotypes in the herbal extracts. Jervine, a primary alkaloid found in V. lobelianum (23, 24), has been identified as an inhibitor of the Hedgehog pathway in nasopharyngeal carcinoma—a crucial cellular pathway involved in cell growth, differentiation, and tissue formation (25-27).
Consistent with findings in human carcinoma studies, the mRNA expression profile indicated that two orthologs of Hedgehog signaling components in
C. elegans were significantly downregulated upon treatment with the
V. lobelianum extract (
Figure 5A, (28, 29)). This suggests that inhibited Hedgehog signaling might trigger DNA damage checkpoint activation, followed by germline apoptosis (Fig 3C, 3D, and 3E). Specifically,
wrt-1 expression showed a change of 1.06 vs 0.58 in control vs.
V. lobelianum, with a significance of P=0.0412, and
hog-1 expression displayed a change of 1.11 vs 0.58 in control vs.
V. lobelianum, with a significance of P=0.0379. However, surprisingly, when jervine was used alone but not as part of the herb extract, it led to the upregulation of the hedgehog signaling pathway (
Figure 5B). This indicates a different effect compared to its use within the herb extract. Indeed, unlike the
V. lobelianum extract, jervine
per se did not increase the level of pCHK-1 foci or apoptosis (
Figure 5C, 1.4 vs 0.6, P < 0.0001;
Figure 5D, 1.4 vs 1.0, P = 0.1077). These observations collectively suggest that the
V. lobelianum extract induces the DNA damage checkpoint and apoptosis in a manner independent of jervine in the
C. elegans germline while also compromising the hedgehog pathway.
O. cornuta and the MAPK kinase pathway
Similar to
V. lobelianum, O. cornuta extracts triggered the activation of DNA damage checkpoints, induction of germline apoptosis, and defects in germline development (
Figure 2 and 3). However, a notable distinction emerged:
O. cornuta extract led to upregulation of several components within the hedgehog pathway, such as
wrt-1 and
hog-1 expression, which were downregulated in the
V. lobelianum extracts. This suggests distinct mechanisms between the two herbal extracts (
Figure 5E, 1.0 vs 1.4 in control and +
O.c. for
wrt-1 expression, P = 0.0040; 1.1 vs 1.77 in control and +
O.c. for
hog-1 expression, P = 0.0037; 1.06 vs 2.0 in control and +
O.c. for
ptc-3 expression, P<0.0001; 1.07 vs 2.0 in control and +
O.c. for
qua-1 expression, P=0.0005). Consequently, we screened for potential pathways whose expression levels were altered upon exposure to
O.c.
The mitogen-activated protein kinase (MAPK) pathway is a critical signaling cascade that regulates various cellular processes, including cell proliferation, differentiation, and survival. It involves a series of protein kinases that activate each other sequentially through phosphorylation events. In germline development, the MAPK pathway plays a pivotal role in modulating the progression of germline nuclei through different meiotic stages, ultimately leading to the production of haploid gametes (30, 31).
Surprisingly, the MAPK pathway components
mek-2 and
sos-1 were consistently induced upon treatment with
O. cornuta, indicating their contribution to the response following
O. cornuta treatment (
Figure 6A, 2.53-fold induction over the control in
mek-2 expression, P=0.0006; 6.86-fold induction in
sos-1 expression, P=0.0002 by two-tailed Mann‒Whitney test (30)). Likewise, other players in the MAPK pathway, such as
let-60 (Ras) and
mpk-1 (MAP kinase), were also significantly induced, further validating the activation of the MAPK pathway in response to
O. cornuta treatment (1.74-fold induction over the control in
mpk-1 expression, P=0.0003; 1.43-fold induction in
let-60 expression, P=0.0003).
Since
O. cornuta comprises multiple anticancer compounds, we further tested how these compounds in
O. cornuta function in DNA damage repair. Intriguingly, all five compounds led to the upregulation of
mek-2, and four of them induced the expression of
sos-1, suggesting that the majority of these compounds are involved in activating the MAPK pathway (
Figure 6B). For instance, under sugiol treatment,
mek-2 expression increased 1.7-fold over the control (P=0.0002), and
sos-1 expression rose 3.65-fold (P=0.0002). Likewise, with thymol treatment,
mek-2 expression showed a 2.54-fold increase over the control (P=0.0009), and
sos-1 expression increased 4-fold (P=0.0009).
Provocatively, linoleic acid induced all four MAPK components, while the other four compounds reduced one or two genes. This implies an unequal contribution of these compounds to the phenotypes in the
O. cornuta extract (
Figure 6B). Specifically, we observed significant increases: 14.13-fold in
mek-2 (P=0.0016), 9.65-fold in
sos-1 (P=0.0007), 2.82-fold in
mpk-1 (P=0.0002), and 6.9-fold in
let-60 expression (P=0.0003).
Given that the expression pattern of linoleic acid is similar to that of
O. cornuta extracts across four MAPK genes, we explored whether linoleic acid could induce the meiotic defects and activate DNA damage checkpoints observed in
O. cornuta treatment. Notably, linoleic acid treatment prompted the activation of the DNA damage checkpoint, as evidenced by the increased presence of pCHK-1 foci during the pachytene stage (
Figure 6C, 1.5 vs 3.5 in control and linoleic acid, P<0.0001). This activation of the DNA damage checkpoint consequently triggered apoptosis in germline nuclei, mirroring the observations from
O. cornuta treatment (
Figure 6D, 1.4 vs 3.3 in control and linoleic acid, P<0.0001). In contrast, among the other four compounds extracted from
O. cornuta, none demonstrated a simultaneous increase in both pCHK-1 foci and apoptosis. This observation suggests that the phenotypic effects present in
O. cornuta are uniquely represented by linoleic acid.
The elevated expression of multiple MAPK pathway components suggests a pivotal role for the MAPK pathway in response to
O. cornuta treatment. We further examined whether the MAPK pathway is indeed responsible for the phenotypes exhibited upon
O. cornuta exposure. To explore this connection, we employed the
mpk-1(ga111) mutant strain, which exhibits a potential deficiency in MEK activation in the context of
O. cornuta exposure (32). In alignment with our mRNA expression data, defective MEK activation reversed the reduction in survivability, highlighting the substantial involvement of the MAPK pathway in the response to
O. cornuta treatment (
Figure 6E). While
O. cornuta treatment significantly decreased the survival rate of wild-type worms (86.5 vs. 60.8 on day 3, P=0.0015; 63.4 vs. 41.3 on day 6, P=0.0077), the
mpk-1 mutants showed no marked difference compared to the control groups (82.1 vs. 79.2 on day 3, P=0.3962; 66.0 vs. 65.4 on day 6, P=0.4799 by the two-tailed t test).
Moreover, this mutant exhibited a suppressed level of apoptosis, further supporting the idea of MAPK pathway-dependent DNA damage pathway activation and survivability upon
O. cornuta exposure (
Figure 6F, 0.2 vs 1.6 in
mpk-1(ga111) +
O.c. and wild type/N2 +
O.c., P=0.0173). All these observations suggest that the MAPK pathway is indispensable for proper survival; therefore, losing MEK activation eliminates the reduction in survival. In summary, our data collectively demonstrated that various constituents of the
O. cornuta extract enhance MAPK pathway elements and impact worm survival through this pathway. Notably, linoleic acid emerges as a significant player in this intricate process.