There is a huge body of evidence exhibiting that alcohol could alter gene expression through epigenetic processes [
40]. Epigenetic mechanisms, such as acetylation of the N-terminal tails of histones that pack up DNAs to nucleosomal remodeling, could cause transcriptional change in addiction, which may recompense related genes in specific bain regions contributing to the helpful phenotype such as alcohol tolerance. Studies that exploit alcohol withdrawal to bring depressive-like behaviors have assumed different ways and intervals of alcohol exposure and withdrawal. However, a relationship might exist between individual sensitivity to the aversive properties of ethanol and risk for alcohol dependency. An important confusing factor to deliberate is that the molecular changes induced by alcohol consumption itself and withdrawal from habitual alcohol use may not be related to the depressive-like behavior. Therefore, it might be important to establish a causal role for specific epigenetic mechanisms and alterations of gene expression induced by alcohol explicitly in depressive-like condition [
41]. Epigenetic mechanisms may also play an imperative role in depression [
42]. Analytical methods of genome-wide DNA methylation and histones modification profile have delivered respected information to establish the functional role of histone-modification could indicate on specific genes [
43]. Alcohol dependency may actively lead to relaxed chromatin because of the downregulation of DNA/histone methylation. Otherwise, chronic exposure might in part lead to close-fitting chromatin bundle. Consequently, alcohol drinking may affect epigenetic mechanisms responsible for adaptation alterations of several brain paths probably linked to stress management [
44]. After withdrawal, chromatin may tend to the condensed state via the upregulation of DNA and/or histones [
45]. For example, mRNA expression levels are significantly lower compared to controls, which correspond to alterations in DNA methylation in a rodent model [
46]. Therefore, DNA methylation might be a target for pharmacological interventions for alcohol dependency [
46]. In addition, DNA methylation could be a good biomarker of alcohol consumption [
47]. Exposure to ethanol during adolescence might upregulate DNA methyltransferase activity, which can induce hypermethylation of various genes such as coding for neuropeptide Y (NPY) and BDNF [
48]. Furthermore, prenatal exposure to alcohol may generally trigger epigenetic modifications depending on the development stage, which may contain increased histone acetylation and/or reduced DNA/histone methylation [
49]. In this regards, alcohol withdrawal may lead to dysregulated histone acetylation via the increased expression of histone deacetylase (HDAC) in some brain areas [
50]. Hence, the treatment with HDAC inhibitors can amend negative emotional conditions brought by alcohol withdrawal [
50]. However, histone acetylation in the brain of depression-like behavior through withdrawal after alcohol exposure may require further intensive examination.