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A peer-reviewed article of this preprint also exists.
supplementary.pdf (153.47KB )
This version is not peer-reviewed
Submitted:
30 May 2024
Posted:
30 May 2024
You are already at the latest version
Kruskal-Wallis | Dunn/Bonferroni p-value | |||
Gene | p-value | TN vs HS | TN vs HSAX | HS vs HSAX |
HSF1 | 0.1495 | ns | ns | ns |
HSF2 | 0.0222 | ns | ns | 0.0174 |
HSF3 | 0.2199 | ns | ns | ns |
HSP90 | 0.1299 | ns | ns | ns |
HIFIA | 0.8948 | ns | ns | ns |
SOD1 | 0.1990 | ns | ns | ns |
SOD2 | 0.0030 | 0.0916 | ns | 0.0024 |
ROS-1 | 0.3722 | ns | ns | ns |
GPX1 | 0.0745 | ns | ns | ns |
GPX3 | 0.0274 | ns | 0.0331 | ns |
HMOX1 | 0.8490 | ns | ns | ns |
CAT | 0.8342 | ns | ns | ns |
CASPAS3 | 0.1299 | ns | ns | ns |
GSTTI | 0.5225 | ns | ns | ns |
TXN | 0.0018 | ns | 0.0520 | 0.0016 |
TXN2 | 0.1034 | ns | ns | ns |
PRDX1 | 0.0515 | ns | ns | ns |
LOX | 0.0131 | ns | 0.0105 | ns |
MYB | 0.0589 | ns | ns | ns |
IL-4 | 0.1169 | ns | ns | ns |
CLDN1 | 0.0214 | ns | ns | 0.0174 |
OCLN | 0.3679 | ns | ns | ns |
MUC2 | 0.0035 | 0.0798 | ns | 0.0029 |
CDH1 | 0.5671 | ns | ns | ns |
Gene | Cellular component | Molecular function |
Biological process |
Transcript IDs |
HSF2 (heat shock transcription factor 2) |
nucleus, cytoplasm | DNA-binding transcription factor activity, DNA-binding transcription activator activity, RNA polymerase II-specific, RNA polymerase II cis-regulatory region sequence-specific DNA binding | cellular response to heat, positive regulation of transcription from RNA polymerase II promoter in response to heat stress, regulation of transcription, DNA-templated | ENST00000368455 ENST00000452194 |
SOD2 (superoxide dismutase 2, mitochondrial) | mitochondrion | superoxide dismutase activity, oxidoreductase activity, manganese ion binding, metal ion binding, identical protein binding | response to oxidative stress, oxidation-reduction process, negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway, response to hydrogen peroxide, removal of superoxide radicals | ENSGALT00000019062 |
GPX3 (glutathione peroxidase 3) | extracellular space | glutathione peroxidase activity, selenium binding, identical protein binding | response to oxidative stress, hydrogen peroxide catabolic process | ENSGALG00010016480 |
TXN (thioredoxin) | nucleus, cytosol, extracellular region | protein disulfide oxidoreductase activity | oxidation-reduction process, cell redox homeostasis, negative regulation of hydrogen peroxide-induced cell death, positive regulation of peptidyl-serine phosphorylation, positive regulation of peptidyl-cysteine S-nitrosylation, negative regulation of transcription by RNA polymerase II, positive regulation of DNA binding | ENSGALT00000025326 |
LOX (lysyl oxidase) |
extracellular space | protein-lysine 6-oxidase activity, copper ion binding, collagen binding | peptidyl-lysine oxidation, collagen fibril organization | https://www.ncbi.nlm.nih. gov/gene/396474 |
CLDN1 (claudin 1) | cell junction, bicellular tight junction, integral component of membrane, cytoplasm | structural molecule activity | bicellular tight junction assembly, cell adhesion, regulation of ion transport | ENSGALT00000077095 ENSGALT00000030190 |
MUC2 (mucin 2) |
extracellular matrix, intracellular membrane-bounded organelle, supramolecular fiber | protein binding, virion binding, antigen binding | cholesterol homeostasis, intestinal cholesterol absorption, maintenance of gastrointestinal epithelium, negative regulation of cell growth, macrophage activation involved in immune response | https://www.ncbi.nlm.nih. gov/gene/414878 |
Kruskal-Wallis |
Dunn/Bonferroni p-value |
||||||
Measurements | TN | HS | HSAX | p-value | TN vs HS | TN vs HSAX | HS vs HSAX |
VH (μm) | 992.79 ± 118.97 |
1061.89 ± 235.73 | 893.08 ± 170.00 | 0.0471 | 1 | 0.0552 | 0.2046 |
CD (μm) |
164.28 ± 32.67 |
145.08 ± 19.09 |
197.87 ± 42.86 |
2.05e-06 | 3.77e-02 | 2.63e-02 | 9.30e-07 |
VSA (μm) |
108602.30 ± 31508.84 |
152946.60 ± 70507.57 |
99497.84 ± 39296.00 |
0.0050 | 0.0995 | 0.8640 | 0.0042 |
VH:CD (μm2) |
6.31 ± 1.59 |
7.13 ± 2.00 |
4.67 ± 1.21 |
2.39e-07 | 3.59e-01 | 4.17e-04 | 2.41e-07 |
Ingredients (%) | Starter | Finisher |
Corn | 54.86 | 63.14 |
Soybean Meal | 39.99 | 30.09 |
Soybean oil | 2.00 | 4.50 |
Limestone | 1.27 | 0.85 |
Monocalcium phosphate | 0.75 | 0.50 |
Lysine (%) | 0.23 | 0.18 |
Methionine (%) | 0.14 | 0.12 |
Threonine (%) | 0.20 | 0.16 |
Sodium chloride (%) | 0.43 | 0.35 |
Sodium bicarbonate | 0.12 | 0.10 |
Vitamin-mineral premix | 0.50 | 0.50 |
Astaxanthin supplement¹ | 0.01 | 0.01 |
Total | ||
Calculated analysis | ||
ME (kcal/kg) | 2909 | 3203 |
CP (%) | 22.09 | 18.07 |
Calcium (%) | 0.75 | 0.52 |
Total Phosphorus (%) | 0.57 | 0.47 |
digPhosphorous (%) | 0.30 | 0.23 |
Lysine (%) | 1.39 | 1.10 |
dig Lysine (%) | 1.25 | 0.99 |
Methionine (%) | 0.48 | 0.41 |
dig Methionine (%) | 0.45 | 0.39 |
Cysteine (%) | 0.43 | 0.38 |
Threonine (%) | 1.03 | 0.85 |
dig Threonine (%) | 0.85 | 0.69 |
Tryptophan (%) | 0.33 | 0.26 |
Methionine + cysteine (%) | 0.91 | 0.80 |
Arginine (%) | 1.61 | 1.31 |
Valine (%) | 1.22 | 1.03 |
Isoleucine (%) | 0.93 | 0.76 |
Leucine (%) | 1.89 | 1.63 |
Neutral detergent fiber | 9.13 | 8.78 |
Crude fiber | 3.97 | 3.46 |
Sodium | 0.22 | 0.18 |
Chloride | 0.30 | 0.25 |
Choline (mg/kg) | 1419 | 1200 |
Astaxanthin (mg/kg) | --- | 1.33 |
¹Astaxanthin was mixed with the soybean oil and supplemented in the diet during feed mixing. |
Gene | NCBI Accession No. | Primer set (5’-3’) |
---|---|---|
GAPDH | X00182 | F:5' -CGCAAGGGCTAGGACGG |
R:3' -GCGCTCTTGCGGGTACC | ||
β-ACTIN | NM_205518.1 | F:5' -GAGAAATTGTGCGTGACATCA |
R:3' -CCTGAACCTCTCATTGCCA | ||
TBP | NM_205103.1 | F:5' -TAGCCCGATGATGCCGTAT |
R:3' -GTTCCCTGTGTCGCTTGC | ||
HSF1 | NM_001305256.1 | F:5’-AAGGAGGTGCTCCCAAAGTA |
R:3’-TTCTTTATGCTGGACACGCTG | ||
HSF2 | NM_001167764.2 | F:5’ -TCTTTTTACAAGCTCCGTGC |
R:3’ -TCCCTTTGTCTCCATTTTGGT | ||
HSF3 | NM_001305041.1 | F:5’ -TTCAGCGATGTGTTTAACCCT |
R:3’ -GGAGGTCTTTTGGATCCTCT | ||
HSP90AA1 | NM_001109785.1 | F:5’ -GATAACGGTGAACCTTTGGG |
R:3’ -GGGTAGCCAATGAACTGAGA | ||
HIF1A | XM_015287264.4 | F:5’ - GTCACCGACAAGAAGAGGAT |
R:3’ -GTCTCTAGCTCACCAGCATC | ||
SOD1 | NM_205064.1 | F:5' -CAACACAAATGGGTGTACCA |
R:3' -CTCCCTTTGCAGTCACATTG | ||
SOD2 | NM_204211.1 | F:5' -CCTTCGCAAACTTCAAGGAG |
R:3' -AGCAATGGAATGAGACCTGT | ||
ROS-1 | NM_205257.2 | F:5' -AAACTACAGCTGGTGTTCCC |
R:3' -CTAAGTTCTCGGCCTTCCAT | ||
GPX1 | NM_001277853.2 | F:5' -AATTCGGGCACCAGGAGAA |
R:3' -CTCGAACATGGTGAAGTTGG | ||
GPX3 | NM_001163232.3 | F:5' -AATTCGGGCACCAGGAGAA |
R:3' -CTCGAACATGGTGAAGTTGG | ||
HMOX1 | NM_205344.2 | F:5' -AATCGCATGAAAACAGTCCA |
R:3' -CACATGGCAAATAAGCCCAC | ||
CAT | NM_001031215.2 | F:5' -TGGCCAATTATCAGAGGGAC |
R:3' -CTCGCACCTGAGACACATTA | ||
CASP3 | NM_204725.1 | F:5' -GGTGGAGGTGGAGGAGC |
R:3' -TGAGCGTGGTCCATCTTTTA | ||
GSTT1 | NM_205365.1 | F:5' -AACATCCCGTTCGAGTTCAA |
R:3' -CACTATTTGATGGCCCTGTG | ||
TXN | NM_205453.1 | F:5' -GGCAATCTGGCTGATTTTGA |
R:3' -ACCATGTGGCAGAGAAATCA | ||
TXN2 | NM_001031410.1 | F:5' -CGATTGAGTACGAGGTGTCA |
R:3' -CAGAAGAAAACCCCACAAACTT | ||
PRDX1 | NM_001271932.1 | F:5' -GGTATTGCATACAGGGGTCT |
R:3' -AGGGTCTCATCAACAGAACG | ||
LOX | NM_205481.2 | F:5' -TACTTCCAGTACGGTCTGCC |
R:3' -CTCTAACATCCGCCCGATAA | ||
MYB | NM_205306.1 | F:5' -AGCATATACAGCAGCGATGA |
R:3' -TTTCTCATCCTCTTCACGGG | ||
CLDN1 | NM_001013611.2 | F:5' -CATCACTTCTCCTTCGTCAGC |
R:3' -GCACAAAGATCTCCCAGGTC | ||
OCLN | NM_205128.1 | F:5' -CTACAAGCAGGAGTTCGACA |
R:3' -CTCTGCCACATCCTGGTATT | ||
MUC2 | NM_001318434.1 | F:5' -TACAGGGAGTTCTCTGTCCA |
R:3' -TAGGGTGTCTTGACAATCCG | ||
CDH1 | NM_001039258.2 | F:5' -GAACTTCATCGACGAGAACC |
R:3' -CGTTGAGGTAGTCGTAGTCC |
Kruskal-Wallis |
Dunn/Bonferroni p-value |
||||||
Measurements | TN | HS | HSAX | p-value | TN vs HS | TN vs HSAX | HS vs HSAX |
BW (g) | 2673.68 ± 35.71 | 1848.85 ± 61.56 | 1867.83 ± 60.82 | 0.0047 | 0.0095 | 0.0278 | ns |
ADFI (g) | 94.98 ± 1.45 |
70.68 ± 72.24 |
72.24 ± 1.14 |
0.0038 | 0.0047 | 0.0500 | ns |
ADGR (g) | 62.65 ± 0.86 |
42.99 ± 1.46 |
43.45 ± 1.44 |
0.0047 | 0.0095 | 0.0278 | ns |
FCR | 1.52 ± 0.02 |
1.64 ± 0.02 |
1.67 ± 0.03 |
0.0049 | 0.0226 | 0.0119 | ns |
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