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A peer-reviewed article of this preprint also exists.
This version is not peer-reviewed
Submitted:
21 August 2024
Posted:
22 August 2024
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Normal Breast | Breast Cancer | ||||||
---|---|---|---|---|---|---|---|
Microbes | Levels | Functions | Ref. | Microbes | Levels | Functions | Ref. |
Sphingomonas | Higher | Degrades environmental carcinogens, aromatic hydrocarbons and polycyclic aromatic hydrocarbons; protective against ER+ breast cancer | [24,28] | Fusobacterium nucleatum | Higher | Promotes breast cancer cell attachment, invasion and colonization during metastasis; impairs immunity and therapy response; activates β-catenin-mediated oncogene transcription and cell proliferation; produces β-lactamase for resistance to β-lactam antibiotics (e.g., penicillin) | [24,29,30,31] |
Firmicutes, /Actinobacteria |
Higher | Negatively correlate with stromal fibrosis and breast cancer risk; enriched in breast milk | [32,33,34] | ||||
Lactobacillaceae, Acetobacterraceae, Leuconostocaceae Xanthomonadaceae |
Higher | Induce fructose and mannose metabolism and immune-related genes; enriched in breast milk of healthy women | [35,36,37] | Enterobacteriaceae, Staphylococcus | Higher | Induce DNA double-strand break of host cells | [38,39] |
Ralstonia | Higher | Dysregulates genes involved in the carbohydrate metabolism | [35] | ||||
Cyanobacteria, | Higher | Produces anti-cancer molecule (e.g, Cryptophycin F) | [40] | Atopobium, Gluconacetobacter, | Higher | Modulate immunological responses | [24,41,42] |
Proteobacteria, Synergistetes, Tenericutes | Higher | Regulate milk composition and production; | [43,44] | Porphyromonadaceae, Ruminococcaceae, | Higher | Participates in aberrant host metabolism | [40,45,46] |
Prevotellaceae Butyricimonas, |
Higher | Produce short-chain fatty acids (SCFAs) propionate and butyrate that exert anti-tumor activities | [40,47,48,49] |
Sutterella, Verrucomicrobiaceae |
Higher | Also found in cecal microbiota | [40,50,51] |
Acinetobacter, | Higher | Abundant in HR+ and HER2+ breast cancer | [40,52] | ||||
Flavobacterium Hydrogenophaga |
Higher | Abundant in metastatic breast cancer | [40,53,54] | ||||
Alcaligenaceae, Moraxellaceae, Parabacteroides |
Higher | Enriched in breast milk | [40,55] |
Akkermansia (phylum Verrucomicrobia), Thermia, |
Higher | Abundant in TNBC | [40,56] |
Cancer types | Microbes | Levels | Protumor mechanisms | Ref. |
---|---|---|---|---|
Breast | Fusobacterium nucleatum | Increased | Suppresses T cell infiltration into tumors; promotes tumor growth and metastatic progression | [29] |
Anaerococcus, Caulobacter Propionibacterium, Streptococcus, Staphylococcus | Decreased | Positively correlated with oncogenic immune features and T-cell activation-related genes | [81] | |
Bile duct |
Bifidobacteriaceae, Enterobacteriaceae, Enterococcaceae |
Increased | Increased production of bile acids and ammonia, leading to DNA damage in host cells and carcinogenesis | [84] |
Cervical | Fusobacterium spp. | Increased | Associated with increased IL-4 and TGF-β1 mRNA in cervical cells | [85] |
Anaerotruncus, Anaerostipes, Atopobium, Arthrospira, Bacteroides, Dialister, Peptoniphilus, Porphyromonas, Ruminococcus, Treponema |
Increased | Elevates vaginal pH to weaken host defense against infection and promotes tumor formation | [86] | |
Colorectal | Bacteroides fragilis | Increased | Increased interleukin-17 in the colon and DNA damage in colonic epithelium that accelerate tumor onset and elevate host mortality | [87] |
Fusobacterium | Increased | Cancer cell proliferation and distant metastasis | [75] | |
Esophageal | Lactobacillus fermentum | Increased | Establishes acidic environment for growth advantage | [88] |
Helicobacter pylori | Increased | Spread from gastric colonization | [88] | |
Campylobacter spp. | Increased | Causes inflammation that could contribute to carcinogenesis | [89] | |
Porphyromonas gingivalis | Increased | Accelerate cell cycle, promotes cellular migration, and metabolism of potentially carcinogenic substances such as ethanol to carcinogenic derivative, acetaldehyde | [90] | |
Extrahepatic Bile duct |
Helicobacter pylori | Increased | Increases in virulence genes cagA and vacA abundance and promotes tumor formation | [85] |
Helicobacter bilis | Increased | Induces inflammation to contribute to tumor formation | [91] | |
Gallbladder | Fusobacterium nucleatum, Escherichia coli, Enterobacter spp. | Increased | Promotes gallstones development and chronic cholecystitis to contribute to tumor formation | [92] |
Gastric | Helicobacter pylori | Increased | CagA protein suppresses p53-mediated apoptosis of host cells while increasing cell motility, and metastatic phenotype | [93] |
Fusobacterium nucleatum | Increased | Induces epithelial-to-mesenchymal transition | [94] | |
Liver cancer | Helicobacter bifidus | Increased | Contributes to formation of chronic hepatitis that promotes tumor progression | [95] |
Lung | Acidovorax spp. | Increased | Associated with carcinomas with p53 mutations | [96] |
Thermus, Legionella | Increased | Associated with the advanced stage and metastatic cancer | [97] | |
Oral cancer | Fusobacterium nucleatum | Increased | Induces epithelial-to-mesenchymal transition | [94] |
Firmicutes (esp. Streptococcus), Actinobacteria (esp. Rothia) | Increased | Elevated in normal oral tissues | [98] | |
Ovarian | Mycoplasma | Increased | Prevalent in 60% of tumors | [99] |
Pancreatic | Enterobacteriaceae, Pseudomonas spp., Mycobacterium avium, Pseudoxanthomonas, Streptomyces, Bacillus cereus | Increased | Contributes to chemotherapy resistance and immune suppression | [100,101] |
Malassezia globosa | Increased | Induces the complement cascade through the activation of mannose-binding lectin C3 to promote tumorigenesis | [102] | |
Prostate | Pseudomonas, Escherichia, Immunobacterium, Propionibacterium spp. | Increased | Induces prostatitis and differentiation of prostate basal cells into ductal cells to promote tumor formation | [103] |
Propionibacterium acnes spp. | Increased | Induces prostatitis and promotes tumor formation | [104] | |
Staphylococcus | Increased | Induce inflammation of the prostate tissue and promotes tumor formation | [103] | |
Fusobacterium nucleatum, Streptococcus oligosporus | Increased | Induces chemoresistance by regulating autophagy | [105] |
Breast cancer Subtypes |
Microbes | Levels | Sample Type | Ref. |
---|---|---|---|---|
Luminal A | Proteobacteria (Xanthomonadale,) | Increased | Breast tumor | [78] |
Tenericutes, Proteobacteria, Planctomycetes | Increased | Breast tumor | [106] | |
Luminal B | Firmicutes (Clostridium) | Increased | Breast tumor | [78] |
Tenericutes, Proteobacteria, and Planctomycetes | Increased | Breast tumor | [106] | |
HER2+ | Thermi, Verrucomicrobia (Akkermasia) | Increased | Breast tumor | [78] |
Firmicutes (Granulicatella:US31),Bacteroidetes (Dyadobacter) | Increased | Breast tumor | [26] | |
Firmicutes (Filibacter, Anaerostipes), Bacteroides (Cloacibacterium, Alloprevotella), Proteobacteria (PRD01a011B, Stakelama Blastomonas) | Increased | Breast Tumor | [9] | |
Proteobacteria (Burkholderiales, Helicobacter pylori) | Increased | Breast Tumor | [80] | |
TNBC | Streptococcaceae, Ruminococcus | Increased | Breast tumor | [78] |
Actinomycetaceae, Caulobacteriaceae, Sphingobacteriaceae, Enterobacteriaceae, Prevotellaceae, Brucellaceae, Bacillaceae, Peptostreptococcaceae, Flavobacteriaceae | Increased | Breast tumor | [82] | |
Prevotella, Brevundimonas, Actinomyces, Aerococcus, Arcobacter, Geobacillus, Orientia, Rothia, Streptococcaceae, Ruminococcus, phyla Euryarchaeota | Increased | Breast tumor | [78,82] | |
Bartonella, Coxiella, Mobiluncus, Mycobacterium, Rickettsia, Sphingomonas,Azomonas, Alkanindiges, Proteus, Brevibacillus, Kocuria, Parasediminibacterium | Increased | Breast tumor | [107] |
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