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This version is not peer-reviewed
Submitted:
06 September 2024
Posted:
07 September 2024
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Infections | Population | SNPs | Location | Clinical impact | Reference |
---|---|---|---|---|---|
Visceral Leishmaniasis | Iranian 118 patients 156 controls |
rs1946519 (-656 G/T) rs187238 (-137 G/C) |
Promoter region | G allele at the position −656, a protective allele against VL. | [31]. |
rs549908 (+105A/C) | Codon region | ||||
Visceral Leishmaniasis | Indian 204 patients 267 controls |
rs1946519 (-656 G/T) rs187238 (-137 G/C) |
Promoter region | T allele at position−656, a protective against VL. | [30]. |
rs549908 (+105A/C) | Codon region | ||||
Visceral Leishmaniasis |
Iranian (East Azarbaijan) 91 patients, 185 controls |
rs1946518 (-607A/C) rs187238 (-137G/C) |
Promoter region | No significant association |
[32]. |
Malaria | Saudi Arabian 250 patients 200 controls |
rs574429 (G to C) rs544354 (G to C) |
Promoter region | Increased susceptibility to P. falciparum infection and related parasitemia | [25]. |
Severe malarial anemia (SMA) | Western Kenyan 123 patients 400 controls |
rs1946518 (-607C/A) rs187238 (-137G/C) |
Promoter region | −137G/−607C (GC) haplotype associated with increased susceptibility to SMA. −137C/−607C (CC) significantly associated with childhood mortality |
[68]. |
Uncomplicated Malaria |
Nigerian 171 patients 166 controls |
rs1946518 (-607C/A) rs187238(-137G/C) |
Promoter region | No significant association |
[69]. |
Chronic Chagas Disease |
Brazilian 849 patients 202 controls |
rs2043055 (A/G) | Promoter region |
No significant association |
[34]. |
Intestinal amoebiasis |
Iraq 25 patients 25 controls |
rs1866694757(CC /CA) rs1946518(TT /TG) rs1946519(CC/AC) rs1215648807(AA /AC) |
Promoter region |
Increased susceptibility and associated with progression of E. histolytica infection |
[36]. |
rs940255648 (GG /GC) rs1037707423 (CC /CT) rs1213044637 (GG /GA) rs1866697972 (GG /GT) rs1866698066 (GG /GT) rs1866698286 (AA /TT) |
Promoter region | Protection against progression of infection | |||
HIV infection | Indian 500 patients 500 controls |
rs187238(-137G/C) | Promoter region |
Associated with the progression of HIV-1/AIDS | [38]. |
HBV infection | Indian 271 patients 280 controls |
rs1946518(-607 A/C) rs187238(-137 C/G) |
Promoter region |
Allele A at position -607: a protective allele against HBV infection Allele C at position -137 is associated with increased susceptibility to HBV infections. |
[70]. |
HBV infection | Chinese 376 patients 254 controls |
rs187238 (-137 G allele and GG genotype -137 G/C) |
Promotor region |
Protection against HBV infection |
[40]. |
HBV infection | Chinese Han 231 patients 300 controls |
rs187238 (-137 G/C) rs1946518 (-607C/A) |
Promotor region | -137C allele protective against HBV infection -607AA genotype associated with increased susceptibility to HBV |
[41]. |
HBV infection | Thailand 140 patients 140 controls |
rs1946518 (-607 A/A) |
Promotor region | Associated with progression of HBV infection. | [50]. |
HBV infection | Korean 730 patients 320 controls |
rs1946519 (−667G>T) rs187238 (-148 G>C) |
Promotor region |
Associated with HBV clearance |
[56]. |
rs360721 (+8925C>G) | Intron 1 | ||||
rs549908 (+13925A>C) | Exon 4 | ||||
HBV-related HCC* |
Chinese 153 Patients 165 controls |
rs1946518 (-607 C/A) rs187238 (-137 G/C) |
Promoter region | Protective allele against HBV-related HCC | [52]. |
HCV infection |
Indian 204 Patients 350 controls |
rs1946518 (-607C/A) |
Promoter region | −607 position with A/A allele associated with protection against disease severity |
[71]. |
HCV infection |
Tunisian 81 patients 82 controls |
rs187238 (-137G/C) | Promoter region | Associated with disease severity |
[72]. |
Tuberculosis |
Indian 165 patients 173 controls |
rs1946518 (–607(C/A) rs187238 (–137G/A) |
Promoter region | No significant association |
[73]. |
Tuberculosis | Chinese 407 patients 469 controls |
rs1946518 (–607(C/A) rs187238 (–137G/C) |
Promoter region | Increased susceptibility to tuberculosis | [74]. |
Tuberculosis | Indian 505 patients 200 controls |
rs1946518 (–607(C/A) rs187238 (–137G/C) rs1800795 (-174G>C) |
Promoter region | AC genotype of IL-18 -607A>C increased susceptibility to PTB in the patients affected with co-morbid diabetes mellitus | [75]. |
Tuberculosis | Russia 334 patients 183 Controls |
rs549908 (105C/A) | Promoter region | C allele and CC genotype of 105 A/C predisposes to the progression of disseminated TB |
[76]. |
H-Pylori infection |
Korean 456 Patients 222 controls |
rs1946519 (−656 G/T) rs1946518 (−607 C/A) rs187238 (−137G/C) rs360718 (+113 T/G) rs360717 (+127 C/T) |
Promoter region |
−137G/C, 113T/G, +127C/T associated with protection against H. pylori infection | [66]. |
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