The
Aspergillus genus comprises ubiquitous fungi, whose medical importance lies in their opportunistic behavior [
47].
A. flavus is the second most clinically relevant species after
A. fumigatus [
5,
7,
23], and it is even more prevalent in tropical and subtropical regions with arid climates [
48]. Here, we assessed the optimal conditions for growth and biofilm formation of
A. flavus, emphasizing how temperature affects its development and response to stressors. The isolate MMe18 was identified as
Aspergillus flavus, sourced from the hospital environment of the “Federico Gómez” Children’s Hospital of Mexico. Its growth occurred within 5 to 7 days at 28 °C, with morphological characteristics consistent with the species
A. flavus (
Figure 1a,c). This included the presence of numerous brown sclerotia, between 500 and 1000 µm in diameter on SDA medium (
Figure 1b). Accordingly, our
A. flavus isolate is classified as the L morphotype (>400 µm) [
23,
49]. Ohkura et al. [
50] suggest that the L morphotype is adapted to environments with less microbial competition, where the ability to capture limited nutrients is crucial. Molecular identification confirms the identity of this isolate (
red arrow), within the
A. flavus-clade (
green), which comprises four lineages, primarily
A. flavus and
A. parasiticus. This clade is further grouped within the
Flavi section (
blue), where
A. tamarii is also observed. The
A. flavus- and
A. tamarii-clades are phylogenetically closely related and, along with the
A. bertholletius- and
A. nomius-clades, form a distinct lineage within the
Flavi section [
51]. The development of this fungus in different media was assessed by colony diameter (
Figure 2a), final conidia concentration (
Figure 2b) and the logarithm of the ratio of total conidia/colony area (
Figure 2c). Radial colony growth was inversely proportional to temperature, with measures not exceeding 4 cm at 42 °C, while larger colonies were observed at 28 °C and 37 °C. The highest conidia count was observed in SDA medium incubated at 37 °C, with a final count exceeding 1 × 10
8 conidia/mL after 7 days. In the other cases, conidia count remained above 1 × 10
7 conidia/mL, even at 42 °C. Furthermore, the conidia/colony ratio increased with temperature, being lower at 28 °C compared to 37 °C and 42 °C. This could be attributed to the thermal stress at higher temperatures, suggesting that conidiation may serve as an optimal dispersion mechanism to ensure fungal survival. This also highlights the capacity of this fungus to proliferate at human physiological temperatures and even higher temperatures, providing an adaptive advantage against the body’s defense mechanisms, such as fever. Fever aims to enhance the activity of immune cells and molecules and disrupt the integrity of pathogens and inhibit their growth through thermal stress, which damages proteins, lipids and nucleic acids [
52]. The ability to grow at body temperature represents a substantial health risk, particularly for vulnerable hosts such as hemato-oncological patients and those experiencing prolonged neutropenia [
53,
54]. The size of
A. flavus conidia enables them to bypass mucociliary clearance and reach the lower airways. Given its ubiquitous presence, nearly everyone is exposed, making
A. flavus a successful opportunistic pathogen that poses significant risks even at low fungal burdens, particularly to immunocompromised individuals [
3,
19,
55]. In a classic study, Ford & Friedman [
56] demonstrated, in a murine model, a correlation between inoculum size and lethality across various
Aspergillus species, with 100% lethality observed at 1 × 10
6 conidia/mL of
A. flavus. Moreover, although immunosuppression with corticosteroids exacerbates the disease, it is not necessary for infection establishment. Other authors addressed this. Usman et al. [
57] demonstrated that a fungal burden of 1 × 10
4 conidia/mL of
A. flavus causes 80% lethality in
C. elegans and
G. melonella while for immunocompetent rabbits, a concentration of 0.75–1 × 10
8 conidia/mL is sufficient for establishing a paranasal infection [
58]. Temperature is crucial for microbial adaptation, colonization, and proliferation. The ability to thrive at 37 °C is a common trait of pathogenic microorganisms [
21], suggesting a link between growth and germination at this temperature and the pathogenicity of
Aspergillus species [
59]. Therefore, in this study, we assessed the fungus’s capacity to grow at higher temperatures, as well as its germination and metabolic activity.
Figure 3a shows the development of
A. flavus in liquid medium at 28 °C, 37 °C and 42 °C. Observations were made every 2 h for a total 10 h using an inverted microscope. Conidia incubated at 37 °C began to germinate after 4 hours, coinciding with a higher germination percentage (
Figure 3b) and the highest values of metabolic activity (
Figure 3c). This is followed by conidia incubated at 42 °C. In contrast, conidia incubated at 28 °C started germinating up to 6 hours and showing the lowest germination percentage and metabolic activity values throughout the incubation period. Notably, after 8 h of incubation at 37 °C, the germinated conidia began to group into microcolonies, forming the basis of hyphal networks. This behavior was more pronounced with an inoculum of 1 × 10
5 conidia/mL (
Figure S2). Morelli et al. [
60] attributes this to thigmotropism, a well-studied phenomenon in plants and phytopathogenic fungi, and already documented in
A. fumigatus [
61]. In an in vivo model of fungal infection using silkworms (
Bombyx mori), Kumar et al. [
62] reported that
A. flavus conidia germinates after 6 hours and continues up to 12 h post-inoculation with 1 × 10
6 conidia/mL, incubating at 26 °C and 80% humidity. These findings are consistent with our in vitro observations. It can be inferred that physiological temperature accelerates the germination of
A. flavus conidia. The germination process involves the breaking of dormancy, where dormant conidia (
D) undergo isotropic growth, leading to an increase in size (
S) and progress to germination (
G), characterized by the emergence of the germ tube. This is closely influenced by environmental factors such as nutrient availability, temperature and oxygen tension [
60,
63] and triggers metabolic pathways responsible for cell wall remodeling [
64]. Biofilm growth is common in nature. Microorganisms interact within mixed communities enabling them to withstand hostile environmental conditions, including those present within the human body. The role of these microbial consortia in chronic and recalcitrant infections, which are often associated with lower therapeutic success rates, is well-documented [
65,
66]. To assess the biofilm-forming capacity of this
A. flavus isolate and determine the optimal conditions, its development was monitored over 72 h, assessing different temperatures and initial conidial densities.
Figure 4a illustrates the biofilm formation kinetics with an inoculum of 1 × 10
6 conidia/mL, incubated at 28 °C (
circles), 37 °C (
squares), and 42 °C (
triangles). The curve exhibits a sigmoidal pattern, characteristic of microbial growth curves, with lag phase between 0 and 12 hours of incubation. At this point, no difference in biomass quantification was observed regardless of the development temperature. When the biofilm is initiated with 1 × 10
7 conidia/mL, biomass increase occurs earlier, resulting in an attenuated adaptation phase (
Figure S3). This is followed by a logarithmic growth phase, observed between 12 and 48 hours. At 48 hours, peak biomass is achieved at 28 °C and 42 °C, after which it declines. In contrast, at 37 °C, the growth rate slows but slightly increases rather than declining. These findings are consistent with Morelli et al. [
60], who describe three basic phases of
A. fumigatus biofilm development: initiation (0–12 h), immature (12–24 h), mature (>24 h). Based on this, we propose the following phases for the
A. flavus biofilm development:
1. Initiation phase (0–12 h): which includes adhesion, germination and the start of filamentation, with a slight increase in biomass;
2. Biofilm consolidation phase (12–48 h): characterized by a significant biomass increase due to active hyphal development and the formation of multi-layered networks;
3. Maturation phase (48–72 h): the growth rate slows, the biofilm morphology becomes well-structured and defined, and biomass reaches its peak;
4. Dispersion phase (>72 hours): marked by biomass abatement and conidial dispersion. It was confirmed by studying the biofilm morphology (
Figure 4b). After 12 h, hyphal staining was minimal, making the morphology nearly indistinguishable regardless of temperature, with only a slight increase at 42 °C. At 24 hours, greater staining was observed in the biofilm incubated at 37 °C. Upon maturation, the biomass staining was similar across the assessed temperatures. Additionally, the dry weight of the mature biofilm (
Figure 4c) shows that the highest biomass was obtained at 37 °C, followed by 42 °C, and the lowest at 28 °C. González-Ramírez et al. [
61] compared the biofilm formed by clinical and environmental isolates of
A. fumigatus incubated at 28 and 37 °C. Both isolates form a mature biofilm within 24 h, with development favored at 28 °C. They attributed the reduced growth at higher temperatures to thermal stress, regardless of the isolate’s source. In contrast, our observations suggest that this
A. flavus isolate may possess adaptive mechanisms enabling it to thrive at higher temperatures, which could aid its establishment in the human body, particularly in hospital environments. It is evident that higher initial inoculum concentrations accelerate biofilm development, resulting in a less defined formation curve, as seen with 1 × 10
7 conidia/mL (
Figure S3). Mowat et al. [
67] studied how initial inoculum density affects mature
A. fumigatus biofilm. They found that higher inoculum concentrations led to reduced biomass and biofilm thickness, poorer filamentation, and increased susceptibility to mechanical damage. Hornby et al. [
68] found that inoculum size shapes
Ceratocystis ulmi development: higher concentrations favor blastoconidia, while lower concentrations promote mycelial growth, attributed to quorum-sensing molecules (QSM) secreted by the fungus. The phenomenon of auto-inhibition prevents conidia from germinating by releasing auto-inhibitors when cell density is very high. We observed a similar effect when evaluating the germination kinetics with an inoculum of 1 × 10
7 conidia/mL (
Figure S2). The biofilm-capacity has been widely studied in
Aspergillus genus, primarily focused on
A. fumigatus due to its significant clinical impact [
69]. Villena et al. have detailed
A. niger biofilms, exploring their characteristics and biotechnological applications [
70,
71,
72]. Our group has characterized biofilms of
A. fumigatus [
61] and
A. terreus [
73]. Although
A. flavus biofilm has been studied [
74,
75,
76], no studies to date have provided a comprehensive step-by-step characterization of this process. To our knowledge, this study represents the first attempt to characterize the in vitro biofilm of
A. flavus using an integrative approach. We used scanning electron microscopy (SEM) to provide a detailed description of the biofilm architecture, as shown in
Figure 5. After 4 h of incubation, germination occurred at 37 and 42 °C, but at 28 °C, only conidia were visible, consistent with observations in
Figure 3a. Our analysis showed that germination is faster at 37 and 42 °C than at 28 °C. Higher magnification reveals differences in the surface structure of germinated conidia and germ tubes, attributed to variations in cell wall composition. At this stage, two key events for colonization and biofilm formation are evident: adhesion and germination. Adhesion partially relies on conidial topography and cell wall composition, which mediate hydrophobic and electrostatic interactions with the surface [
77]. Villena & Gutiérrez-Correa [
72] described how the rough conidial surface of
A. niger aids initial fungal-substrate contact. During germination, the hydrophobic layer is lost, revealing the hyphal cell wall [
64,
78,
79]. After 8 h, conidia at 28 °C began to germinate, while at 37 and 42 °C, primary hyphal networks formed. At 12 h, a monolayer of hyphae is seen at 28 °C, whereas at 37 and 42 °C, multilayered networks and hyphal junctions forming interhyphal channels mark the onset of biofilm consolidation. At this point, susceptibility to external stressors decreases [
60,
80]. Between 24 to 48 h, biofilm growth accelerates. SEM images reveal minimal topographical differences across the temperatures, although the biofilms exhibit well-defined characteristics. Multilayering intensifies, hyphal anastomosis is extensive, and interhyphal channels are more evident, along with EPS production, indicating a mature biofilm. At 42 °C, the presence of aspergillary heads is notable due to reduced biofilm formation under nutrient-rich and thermal stress conditions, suggesting that the fungus relies on conidiation and subsequent propagation as survival strategy. It has been reported that some genes involved in conidiogenesis also play roles in stress response signaling pathways [
81,
82]. Finally, after 72 h of incubation, biofilms at 28 and 42 °C exhibit reduced turgor and thickness, indicating the entry to senescence and dispersion phase. In contrast, at 37 °C, biofilm stratification increases, and germinating conidia are observed. This is consistent with CV biomass quantification, which shows a slight increase at 72 h rather than a decrease (
Figure 4a). Thus, it is hypothesized that the dispersion phase could extend up to 96 h under these conditions, as observed in
A. terreus biofilm by Rayón-López et al. [
73]. Studying biofilm formation in
Aspergillus spp., requires considering the heterogeneity in development times and environmental and nutritional factors influencing the process.
A. fumigatus, the most clinically significant species in this genus, can develop a mature biofilm within 24 h under optimal conditions, as reported by Mowat et al. [
67] and corroborated by our group [
43,
61]. This rapid biofilm formation likely contributes to its high virulence and prevalence in invasive infections. Other species show significantly longer biofilm maturation periods:
A. nidulans, requires 72 hours [
83], while
A. terreus may take up to 96 h.
A. niger shows notable variability, with biofilm maturation occurring as early as 36 h [
84] or extending to 96 h under different parameters [
71]. This study is the first to detail the in vitro biofilm formation kinetics of
A. flavus, showing a peak at 48 h, followed by a dispersal phase extending up to 72 h at 37 °C. The composition and functional roles of the extracellular matrix (ECM) in microbial biofilms are key to resistance, preservation, and long-term persistence, making it a significant area of interest [
85,
86]. Though ECM composition varies between fungi [
87], it typically includes four macromolecules classes: carbohydrates and proteins, mainly, as well as lipids and nucleic acids. We employed epifluorescence microscopy to identify ECM molecular constituents. As shown in
Figure 6, colocalization of fluorochromes around fungal cells revealed the presence of carbohydrates, nucleic acids and proteins in the ECM, consistent with findings in other
Aspergillus biofilms [
61,
83,
84]. Concanavalin A specifically binds to α-D-mannose and α-D-glucose in glycoconjugates, while calcofluor white stains chitin residues. These carbohydrates are major components of the
Aspergillus spp. cell wall [
78]. Our images show labeling with both fluorochromes within the cells and in extracellular spaces, suggesting that ECM carbohydrates have the same biochemical nature as those in the fungal cell wall. Mitchel et al. [
85] noted that while cell wall and ECM components may be similar, polysaccharides differ in size and branching patterns, suggesting they are synthesized through distinct pathways or undergo modifications after cleavage from the cell wall. Fluorescence labeling with Flamingo
TM confirmed protein presence in the ECM. Conidia exhibited more intense fluorescence than hyphae, regardless of temperature. This disparity may be due to the hydrophobic protein layer on conidia, which, as mentioned, is shed during germination and hyphal development, leading to distinct chemical composition between conidial and hyphal surfaces [
64,
88]. A slight increase in Flamingo
TM fluorescence was detected in the ECM at 28 °C compared to 37 and 42 °C. Additionally, protein inclusions were observed within hyphae at 28 and 37 °C, but not at 42 °C. Proteins like dipeptidylpeptidase V (DPPV), catalase B (CatB) and ribotoxin (ASPF1) have been identified in the ECM of
A. fumigatus biofilms [
69,
89]. Interestingly, in
C. albicans, proteins involved in amino acid and carbohydrate metabolism may influence the structural and functional profile of ECM polysaccharides [
90]. Mosier et al. [
91] reported that temperature modifies the proteome of biofilms formed by acid mine drainage (AMD) consortia, composed of bacteria, archaea and filamentous fungi, with an upregulation of proteins related to amino acid transport and metabolism. Similarly, development temperature affects
Clostridium perfringens biofilm morphology: at 37 °C, an adherent biofilm morphotype is observed, while at 25 °C, the biofilm exhibits a non-adherent phenotype and increased susceptibility to mechanical disruption [
92]. A subsequent study found that EPS synthesis is temperature-dependent, serving as a survival strategy under hostile conditions and host colonization [
93]. Although temperature’s impact on fungal biofilm development has been extensively studied in models such as
C. albicans [
94,
95] and
A. fumigatus [
61], little is known about its effects on ECM composition. The presence of eDNA in the ECM was confirmed by propidium iodide staining. eDNA was detected within conidia and hyphae, and more prominently in the intercellular spaces at 37 °C, where it appeared as sticky, diffuse regions colocalizing with glycoconjugates, as described by Shopova et al. [
96] in
A. fumigatus. Although eDNA is a minor ECM component and is mainly consists of non-coding sequences [
90,
97], it is crucial for cell adhesion and cohesion in the biofilm, enhancing structural stability and resistance to stressors, including antifungals agents [
98]. Rajendran et al. [
97] showed that eDNA release is phase-dependent, and peaks during the maturation phase, largely as a result of autolysis. In
A. nidulans biofilm, proteases and chitinases activities are linked to nutritional stress responses [
99] and triggered during maturation and senescence. These enzymes degrade ECM polymers and cellular components, supplying alternative carbon and nitrogen sources, as described in bacterial biofilms [
100,
101]. Around 14–15% of the ECM in fungal biofilms is composed of lipids [
102], with neutral glycerolipids being the most abundant, followed by sphingolipids [
90]. Nile red staining confirmed the presence of lipids in the
A. flavus biofilm (
Figure 7), with minimal fluorescence detected in the ECM, suggesting that lipids are a minor component of this, consistent with other fungal models. Higher fluorescence was observed within conidia, and abundant lipid droplets (LDs) were noted inside the hyphae (
Figure 7,
green arrows). The size of these LDs varied with temperature, appearing larger at 28 °C, while smaller inclusions were seen at 37 °C and 42 °C, which was confirmed by Sudan Black B stain (
lower panel), similarly to Nemcová et al. [
103], who found that
Metschnikowia yeasts accumulate lipids more efficiently at 15 °C than at room temperature. Although further research is needed, lipids in the ECM are thought to contribute to structural integrity and surface adhesion [
84,
104]. LDs are amphipathic lipid membranes encasing neutral lipids like triacylglycerols and sterols and are associated with the endoplasmic reticulum (ER) in fungi [
105]. They are involved in various functions, including stress response, apoptosis, and autophagy [
106,
107,
108,
109], and serve as lipid reservoirs during host invasion and mycorrhizal associations, as well as in toxin production and secretion [
110,
111,
112] though their role and behavior in biofilm formation remains less understood. Lattif et al. [
113] suggested that higher lipid levels during the early biofilm phases of biofilm formation may enhance surface adhesion, and they linked this to the presence of lipid rafts in the fungal membrane. They also proposed that higher concentrations of polar lipids, particularly phospholipids and sphingolipids, in biofilm cells may contribute to increased resistance to antifungal agents in biofilms. Our group has also documented LDs in
A. terreus biofilm [
73], suggesting that this could be associated with its oleaginous behavior [
114]. In this context, oleaginous fungi are gaining interest because of their ability to produce and accumulate lipids from various substrates, which has potential biotechnological applications [
44,
103,
115]. As previously mentioned, filamentous fungal biofilms are characterized by multilayered hyphal networks that, along with ECM production, confers resistance to stressors and adverse conditions [
29].
Figure 8 illustrates how temperature affects biofilm density. Higher temperatures result in denser and more compact hyphal networks. This is evidenced by reduced laser penetration during Z-stack imaging when the biofilm develops at 37 °C, something more pronounced at 42 °C, reflecting increased structural integrity at elevated temperatures. This enhanced density and integrity could potentially slow the penetration of antifungal agents, as sequestration of molecules within biofilms has been reported [
76,
90,
116]. In
Table 1 is presented the minimal inhibitory concentration (MIC) of two antifungals against planktonic and biofilm cells of
A. flavus at different temperatures. Both amphotericin B and itraconazole were effective against planktonic cells, highlighting that the MIC for amphotericin B twofold, and itraconazole threefold at 37 °C compared to 28 and 42 °C. Growth at temperatures higher than optimal may induce environmental stress in microorganisms. Stress-induced mutagenesis, leading to antibiotic-resistant phenotypes, has been reported in thermophilic
Bacillus species [
117]. The impact of temperature on the emergence of resistant phenotypes is of significant interest, particularly in the context of climate change, but remains largely unexplored. Recently, Huang et al. [
118] demonstrated that incubating the yeast
Rhodosporidiobolus fluvialis at 37 °C, induces reactive oxygen species (ROS) production, this causes DNA damage and subsequent mutations, leading to the development of hypervirulent and pan-resistant phenotypes. Conversely, no antifungal activity was observed against mature biofilms at any tested temperature, even at concentration higher than 16 µg/mL. This is consistent with previous studies, which have reported that biofilms display significantly higher MICs than planktonic cells [
33,
74,
80,
119,
120,
121]. Our group has previously reported that
Fusarium solani biofilm is less susceptible to antifungal drugs to ultraviolet radiation [
40]. The mechanisms underlying biofilm-associated resistance have been extensively studied. Nett et al. [
30] found that increased β-1,3 glucan content in
C. albicans biofilm cells contributes to their structural integrity and resistance to antifungal agents. Rajendran et al. [
97] observed that eDNA release from lysed hyphae in
A. fumigatus contributes to biofilms resistance, whereas, combining DNase with an antifungal agent improves efficacy. Kowalski et al. [
32] demonstrated that variations in oxygen tension throughout biofilms contribute to voriconazole and amphotericin B resistance. Cells at the biofilm basal layer can restart growth under favorable conditions. Similar findings have been reported in
C. albicans, where persistent cells are known to contribute to antifungal resistance [122].
The next step in our research is to identify the molecular mechanisms involved in conidiation and how they are affected by temperature. Is it a response to heat shock stress? Is it just a mechanism of dispersion? And which other stressful environmental factors are involved in conidiation? Moreover, we would like to know how virulence-associated genes regulation varies with temperature in this model.
We also want to identify the lipids in lipid droplets (LDs) and analyze their role in fungal physiology during biofilm formation. We also aim to investigate how temperature influences their composition, and the expression of genes involved in their biosynthesis and physiology, as well as explore their biotechnological applications.