CBX3 influences gene expression through epigenetic mechanisms [
14] across multiple aspects, involving various subfragments and their distinct activities in different cellular contexts. Notably, a study showed that CBX3 subfragments exhibit anti-silencing activities in pluripotent versus differentiated cells [
15] ; this argues that the differentiation stage of the cell is important for determining efficacy in gene regulation by CBX3 and viceversa [
16]. This is very clear from the loss of anti-silencing activity in differentiated cells by subfragments such as CBX3 (1-339) and CBX3 (340-508) [
15], which indicates that these have become nonfunctional upon cellular differentiation. This loss of function is probably related to the large-scale chromatin remodeling processes that occur as cells leave pluripotency, which could impede retroviral transgene expression. In addition, ChIP-seq analyses have revealed the co-localization of CBX3 with H3K9me3 in the promoter regions of important regulatory genes, such as SMAD-specific E3 ubiquitin protein ligases 1 and 2 (SMURF1 and SMURF2), in addition to reiterating the role of CBX3 in chromatin dynamics and gene silencing [
17]. Aside from its direct effects on VSMCs, CBX3 plays a role in the broader epigenetic changes related to cardiovascular disease [
18,
19]. Epigenetic modifications, such as DNA methylation, histone acetylation, and miRNA expression, have been a major cause of the onset and development of CVDs [
20]. The protein encoded by the CBX3 gene binds to DNA forming constitutive heterochromatin which is critical to stabilize chromosomes and gene expression regulation as well as other nuclear processes[
21,
22]. CBX3 can influence these epigenetic mechanisms, thus modulating the expression of genes important for cardiovascular health as SLC9A1, SLC1A5, TNRC6C [
20]. The protein is engaged in epigenetic regulation through interactions with methylated histone marks including H3K9, H1K26, G9aK185 peptides. This is indicative of a mechanism where CBX3 acts on chromatin structure and gene expression [
23]. Inhibition of CBX3 enhances cellular reprogramming, which means its contribution to genome-wide chromatin dynamics is significant [
24]. Further, the binding of CBX3 to DNA and its association with heterochromatin suggest a potential involvement in regulating gene transcription and chromatin structure, which are critical factors in cardiovascular health [
25]. Targeting CBX3 in CD8+ T cells results in enhanced transcription initiation and chromatin remodeling. This underscores potential interactions between CBX3 and other chromatin modifiers in influencing CVD progression and outcome [
26]. For example, the epigenetic mechanism mediated by CBX3-PRC2 interaction is involved in the regulation of endothelial cell function, angiogenesis, and vascular inflammation, all of which are crucial processes in the pathogenesis of CVD [
27]. CBX3 is reported to modulate the expression of several miRNAs implicated in the cardiovascular function and disease [
28,
29]. CBX3, for instance, was demonstrated to repress the expression of miR-21, a pro-fibrotic and pro-inflammatory miRNA, in cardiac fibroblasts, therefore diminishing cardiac fibrosis and remodeling in response to stress [
30]. Likewise, CBX3 was identified as a regulator for miR-126, an endothelial cell-specific miRNA which is highly important for maintaining vascular integrity and induction of angiogenesis factors [
31,
32]. The binding of CBX3 on specific target genes in neural progenitor cells (NPC) results in the upregulation of cardiac lineage development crucial genes including TNNT3, TBX20, TBX3, HAND1 as well as platelet derived growth factor receptor alpha [
16]. Knocking down CBX3 interestingly showed a different effect on NPC differentiation causing the down-regulation of neural genes, such us SOX1, while simultaneously up-regulating mesodermal genes such as WNT4, particularly those associated with circulatory system development [
16]. The association of reduced CDK8 levels and enrichment of genes related to nervous system development following to CBX3 silencing reflects an intricate regulation newwork among CBX3 and pathways regulating gene expression beyond cardiovascular health. Loss of CBX3 also results in reduced recruitment of CDK8 on genes related to the development of the cardiovascular system, indicating a direct effect in this regulation [
33]. Intriguingly, epigenetic modifications under the control of CBX3 could also alter these circulatory disease-related genes implicated in lipid metabolism, inflammation, and endothelial function which are major pathogenic factors for CVD. Examples demonstrating the impact of lipid-associated CpGs on metabolic genes, including carnitine-palmitoyl transferase and ATP Binding Cassette Subfamily G Member 1 (ABCG1), from studies like the Framingham Heart Study, illustrate the complexity portrayed between epigenetic modifications with CVD [
34]. One of the key genetic factors that would drive the expression of CBX3 in CVD would be genotype effect on DNA methylation at specific loci, such as the ABCG1 locus [
35,
36]. A notable example is actually related to changes in methylation at cg27243685 within the ABCG1 locus, being linked to higher levels of triglycerides and higher risk for new-onset coronary heart disease, as well as having been associated previously with a history of prevalent myocardial infarction [
37,
38]. Additionally, minor allele presence in the intronic variant rs4148086 is related to increased methylation at cg27243685, leading to ABCG1 low expression in blood [
39] . The co-occurrence of these genotypic and epigenetic variants reveals the complexity of gene regulation in CVD, where small genomic regions control any gene modulation through changes in DNA methylation. The full understanding of such tight-regulated mechanisms is necessary for targeted intervention able to influence risk and progression of CVD. Interesetingly, GATA4 is one of the transcription factors that controls cardiac genes and can be influenced by chromatin-modifying proteins [
40]. When considering the altered CBX3 activity and its contribution to specific cardiovascular conditions, it is important to consider ApoC3 expression and downstream effects on cardiovascular health. ApoC3 overexpression is often associated with progressive atherogenesis. Atherogenesis is a condition of plaque accumulation within arterial walls, resulting with severe clinical complications including restenosis of the artery post-surgery [
41]. This suggests that modified CBX3 activity, which might be affect ApoC3 expression, could be inherently related to atherosclerosis development. Induction of inflammation represent one of the major causes through which CBX3 contributes to CVD , and it is a crucial step in the development of atherosclerosi [
42]. Exacerbating the risk of atherosclerosis, thus is an independent effect of traditional cardiovascular risk factors like hypertension and hyperlipidemia [
43]. Besides, CBX3 is involved in metabolic regulation indicating its connection with type 2 diabetes mellitus (DM), which is a major risk factor for CVD. Studies on the genetics level have shown that individuals with type 2 DM are those likely to have overlapping genetic predispositions with subjects that are prone to cardiovascular conditions, as well as revealing the phenotypic interconnected nature of these diseases [
44]. Future studies investigating CBX3 and its applications in the onset and management of CVD will be needed to further development personal treatment approaches and diagnostic tools that could help to improve cardiovascular profiles.
Table 1 lists the epigenetic modifications regulated by CBX3 and their association with CVD.