1. Introduction
Plants are constantly exposed to stress as a result of environmental changes, so plants have developed a complex acclimation system. To activate this system, at least two types of signals are needed: the so-called reactive oxygen species (ROS) wave, which spreads at a tremendous speed from the initial site of stressor impact throughout the plant, and a specific signal from the type of abiotic stressor. The ROS wave, caused by abiotic stress, triggers a cascade of intercellular communication interactions that spreads through various plant tissues and is capable of transmitting a signal over long distances [
1]. However, it has been noted that various abiotic stresses can also lead to specific fluctuations in the ROS wave, causing certain specific rearrangements of transcriptomes and metabolomes [
1]. ROS wave is used for signaling and triggering plant adaptation mechanisms to abiotic stress. As a result of the ROS wave signaling, transcriptomic and metabolomic reprogramming of cells occurs. It is proposed that the ROS wave activates a general acclimation response, independent of specific abiotic stressors, which may induce broad transcriptome and metabolome reprogramming and render plants resilient to multiple different stresses.
The formation of free radicals in biological materials was discovered in the 1950s and it was hypothesized that oxygen radicals were generated by enzymatic reactions in vivo. Oxygen radicals were thought to be cell damaging and to cause oxidative damage to DNA, proteins, lipids, and other cellular components [
2]. However, more recent studies have revealed positive functions of free radicals, including their involvement in metabolic processes and signaling pathways [
3].
ROS have been shown to be produced to initiate redox signals to regulate a wide range of cellular reactions essential for life [
4]. ROS, through redox signaling in plants, initiate a program of gene expression that helps maintain cellular redox homeostasis and are also involved in biological processes related to cell proliferation and differentiation [
5]. While cell death was previously thought to be a direct consequence of ROS-induced oxidative stress, ROS are now believed to activate programmed cell death (PCD) pathways [
6]. Thus, ROS-induced redox signaling acts as an important regulator of various physiological responses. The role of ROS as oxidants and/or components of redox signaling largely depends on the delicate balance between ROS production and detoxification in different subcellular organelles [
7]. This is tightly controlled by the entire redox sensing and signaling networks that regulate cellular ROS levels in space and time by modifying the ROS production and detoxification mechanisms [
8]. In case of low ROS in the cell, they act as positive signaling molecules actively participating in many biologically important processes. With increasing ROS concentration, they can act as highly toxic molecules. The accumulation of ROS in the cell depends on many parameters. The complex process of plant adaptation to abiotic stress involves a whole range of oxidant-antioxidant interaction mechanisms capable of flexibly altering redox signals [
9].
2. Reactive Oxygen Species (ROS) and Their Formation in Plant Cells
Oxygen is an essential element required for normal plant development. In the ground state, oxygen (triplet oxygen,
3O
2) has two unpaired electrons, which is not reactive [
10]. In the process of oxidation-reduction reactions, molecular oxygen is an electron acceptor, it is able to attach from one to three electrons, which leads to the formation of reactive oxygen species (ROS). In biological systems, transition metal ions (Fe
2+, Cu
+) and semiquinones can act as electron donors, resulting in the activation of molecular oxygen [
2]. The term ROS includes not only free radicals (superoxide radical, O
2•–, and hydroxyl radical, OH•, perhydroxy radical (HO
2•), peroxyl (RO
2•), carbonate (CO
3•−), semiquinone (SQ
•-), alkoxy radical (RO•), and peroxy radical (ROO•)), but also molecules such as hydrogen peroxide (H
2O
2), singlet oxygen (
1O
2), ozone (O
3), organic hydroperoxide (ROOH), hypoiodous acid (HOI), hypobromous acid (HOBr), and hypochlorous acid (HOCl) (
Figure 1 ) [
11,
12,
13,
14]
As a result of oxidation-reduction reactions occurring in various compartments of plant cells, ROS are formed due to incomplete or partial reduction of oxygen molecules [
15]. Several reactions associated with ROS formation are shown in
Figure 2.
The mechanisms of ROS formation in biological systems are carried out in the course of non-enzymatic and enzymatic reactions. The mechanisms that trigger a certain type of reaction are regulated by the concentration of oxygen in the system. It is believed that at high concentrations of O
2, ROS formation occurs via the non-enzymatic pathway, and at very low concentrations of O
2, via the enzymatic pathway [
16].
The most common ROS with high oxidizing capacity is the superoxide anion radical (O
2•-). The superoxide anion is formed as a result of the monovalent reduction of the triplet state of molecular oxygen (
Figure 2) [
11]. Among the sources of ROS formed via the enzymatic pathway, mention should be made of xanthine oxidase (XO), the enzyme responsible for the initial activation of oxygen. XO can use xanthine, hypoxanthine, or acetaldehyde as electron donors (
Figure 3) [
17]. The latter has been shown to accumulate under oxygen deficiency, especially during hypoxia [
18].
The next important step in ROS conversion is the dismutation of the superoxide anion (O
2•–) by superoxide dismutase (SOD) to form H
2O
2. The level of H
2O
2 is regulated by an enzymatic set of catalases (CAT) and peroxidases (PX), localized in almost all compartments of the plant cell. The main function of PX is the neutralization of H
2O
2, however, this family of enzymes can also catalyze the formation of O
2•– and H
2O
2 as a result of NADH oxidation. The oxidation of NADH with H
2O
2 produces the radical NAD•, which reduces O
2 to O
2•–, some of which is dismutated to H
2O
2 and O
2 [
19]. Thus, peroxidases and catalases play an important role in the fine regulation of ROS concentration in the cell through the activation and deactivation of H
2O
2 [
11]. Alternatively, hydrogen peroxide can be converted to water by the enzymes catalase or glutathione peroxidase. In the glutathione peroxidase reaction, glutathione is oxidized to glutathione disulfide, which can be converted back to glutathione by glutathione reductase (GR) in a process that consumes NADPH [
20].
Figure 4.
Oxidation and reduction reactions of GSH.
Figure 4.
Oxidation and reduction reactions of GSH.
By scavenging O
2•−, SODs reduce the risk of OH• formation via a metal-catalyzed Haber-Weiss-type reaction, as this reaction occurs 10,000 times faster than spontaneous dismutation [
21]. The reaction results in the formation of H
2O
2, which is also a ROS with a dual role (toxicity and signaling). H
2O
2 can be effectively detoxified if the cellular antioxidant defense mechanism is sufficient. In some ways, this enzyme is unique in that its activity determines the concentrations of O
2•− and H
2O
2, the two substrates of the Haber-Weiss reaction, and so it is likely to play a central role in the defense mechanism (
Figure 5} [
22].
In biological tissues, superoxide can also be non-enzymatically converted to the non-radical species hydrogen peroxide and singlet oxygen (
1O
2) [
23]. In the presence of reduced transition metals (e.g., iron or copper ions), hydrogen peroxide can be converted to the highly reactive hydroxyl radical (•OH).
Another aggressive oxidant is the hydroxyl radical (•OH), which is involved in oxidative damage to DNA bases [
14]. •OH is produced by iron-catalyzed H
2O
2 and O
2•− [
24,
25,
26].•OH can be formed by the ionization of H
2O and also by photolytic decomposition of alkyl hydroperoxides. It is generally assumed that HO• in biological systems is formed by the redox cycle of the Fenton reaction, where free iron (Fe
2+) reacts with hydrogen peroxide (H
2O
2), and the Haber-Weiss reaction, which results in the formation of Fe
2+ when superoxide reacts with ferric iron (Fe
3+) (
Figure 5). In addition to the iron redox cycle described above, a number of other transition metals, including Cu, Ni, Co, and V, may be responsible for the formation of HO• in living cells.
3. Oxidative Stress
Redox reactions are common in living things and are responsible for the majority of ROS generation [
27]. Excessive ROS production, if not scavenged, can lead to so-called “oxidative stress”. Physiological levels and types of ROS in different compartments are highly dependent on the energetic load to which the cellular response is subjected. Even within a single cell, there are at least eight different organelle compartments (mitochondrial matrix, lysosomes, smooth ER/SR, rough ER, Golgi, peroxisomes, nucleus, cytosol), each with its own redox balance [
28]. Therefore, the term oxidative stress should be used when the levels and types of oxidants in a cell or organelle, on average, significantly exceed the level associated with normal homeostatic function for each compartment. In plant cells, redox homeostasis is a normal state in which the antioxidant defense system aims to maintain a balance between ROS production and antioxidant activity [
29]. Under normal conditions, ROS production and levels are safe for normal cellular function, including proliferation, differentiation, signaling, and intercellular communication [
12,
30,
31]. The relationship between ROS and redox changes/regulation in cells is commonly referred to as redox biology and is thought to play a key role in ROS-mediated signaling and/or cellular metabolic regulation [
1,
32,
33,
34]. Because membranes can function as barriers to redox levels, each subcellular compartment can contain its own redox state that will correspond to its own steady-state ROS level, contributing to the formation of a cellular-specific ROS signature during abiotic stress [
35].
Reactive oxygen species are a by-product of aerobic metabolism in various cellular organelles such as chloroplasts, mitochondria, peroxisomes, plasma membranes and cell wall [
14,
36]. The specific generation of ROS in the cell is highly localized and different pathways are extensively involved in this process [
37,
38]. To better understand the ROS scavenging tactics in different subcellular compartments, it is imperative to first study the subcellular compartment-specific ROS generation in cells.
ROS, as signaling molecules, play an important role in biological processes, the so-called “redox biology” [
6,
39,
40,
41]. For participation in the redox signaling process, the basal amount of ROS is crucial [
6,
41]. In case the levels of reduced glutathione are too high, the so-called “reductive stress” can occur, which also has detrimental consequences for the cell [
42,
43]. However, under abiotic stress, when ROS levels in plants are above or below normal levels, a redox imbalance occurs that can cause impairment and/or even loss of certain cellular functions. Low ROS levels trigger signaling that alters normal plant metabolism, while excess ROS initiates oxidative damage to cells [
6,
26]. Therefore, the mechanisms that ensure a stable equilibrium between ROS production and its neutralization must function together and be harmonized [
44,
45].
Thus, redox homeostasis is a prerequisite for the normal functioning of cells and organisms [
46]. It has been previously argued that the cell normally maintains cytosolic thiols in a highly reduced redox state, thus not supporting the existence of reductive stress [
42]. Under stress conditions, ROS accumulation in plant cells disrupts the “redox state” of various proteins, enzymes, receptors, altering or participating in various signal transduction pathways in response to an abiotic factor [
41,
44]. There is a growing understanding that the role of redox metabolism enzymes and metabolites goes far beyond a simple ROS scavenging function. First, as specialized processors of ROS signaling, these enzymes act as integral parts of a complex signaling system [
47].
5. ROS under Abiotic Stress
Abiotic stresses are closely related to climate change and hinder plant growth and development; hence, it also negatively affects crop yield and quality [
13,
105]. Environmental impacts on plants can be both long-term and short-term and vary in strength. Depending on the set of mechanisms launched by plants in response to stress, which can vary significantly for each plant species and even for different varieties of the same species, their tolerance to stress and rapid acclimatization can be determined [
106]. During abiotic stress, ROS production is impaired, resulting in disruption of ROS metabolic and signaling pathways. Metabolic ROS can directly alter the redox status of enzymes involved in the metabolism process, which may lead to changes in the metabolic rate. Alteration of metabolic reactions in the cell may negatively affect defense mechanisms to abiotic stresses (
Figure 7) [
107].
The steady-state ROS level and redox state of the plant cell differ depending on the type of abiotic stress the plant faces. It follows that different environmental conditions lead to the production of a specific set of subcellular ROS and redox signature, which in turn leads to the activation of an acclimation response adapted to them.
Excess ROS and ROS modification lead to changes in the redox balance in the cell, which may alter the function of key regulatory proteins regulating transcription and/or translation [
3,
32]. In contrast, signaling ROS directly alter the redox state of regulatory proteins and alter transcription and translation, resulting in activation of acclimation responses to abiotic stresses, counteracting their negative impact on metabolism and reducing the level of metabolic ROS. Signaling ROS are produced in the apoplast [
108]. These signaling ROS are then translocated into the cytoplasm via regulated aquaporins [
109] where they alter the redox status of key regulatory proteins such as TFs that influence gene expression (
Figure 8)[
34,
79,
110].
As signaling molecules, ROS are distributed in all metabolically active plant tissues and are controlled by the ROS gene network [
111,
112,
113]. ROS, together with Ca
2+ ions, participate in long-range systemic signaling, participating in the activation of acclimation to abiotic stresses [
52,
108]. Plant hormones such as abscisic acid (ABA) and jasmonic acid (JA) trigger ROS production, initiating a systemic signal (ROS wave) [
114]. Hormonally activated ROS move in a loop and activate acclimation mechanisms [
115,
116]. This mechanism is realized in a feedback loop that activates ROS and calcium, thus causing a response of the whole plant to acclimate to abiotic stresses .
Under stress conditions, compartments such as the chloroplast, peroxisomes, and mitochondria have been shown to exhibit expansion of membrane structures that contact the nuclear envelope and can directly alter the ROS state of nuclei [
32]. Metabolic and signaling ROS can be produced in different subcellular compartments (e.g., metabolic ROS in the chloroplast and signaling ROS in the apoplast). However, they can influence each other’s levels and even shuttle between compartments [
109]. Although ROS production is a common phenomenon and part of plant cellular metabolism, environmental stresses lead to excessive ROS formation, which are not only highly reactive but also toxic in nature and damage lipids, proteins, carbohydrates, and DNA [
2,
15]. Higher concentrations of ROS have damaging effects on cellular organelles and tissues of shoots and roots. However, more and more studies have shown that ROS play a dual role in plants [
1,
6]. An important positive role of ROS is to scavenge excess electrons in the chloroplast from the photosynthetic apparatus, thereby preventing antenna overload and subsequent damage. A similar scavenging function is also performed by ROS in the mitochondria. In plant cells, there are several levels of ROS detoxification pathways and mechanisms, which allows ROS to redirect electron flow and prevent overload of various cellular systems during stress [
49]. ROS, as well as their ability to convert into other forms of ROS, may mediate the regulation of metabolic fluxes during stress, preventing damage or excessive accumulation of toxic products. The most beneficial role of ROS during abiotic stress is shown in signaling processes that activate acclimation processes (
Figure 8) [
3,
34,
51,
53,
117]. Plants with impaired ROS production or ROS scavenging were found to be more sensitive to abiotic stresses and also failed to mediate systemic signaling during abiotic stress [
50,
118,
119]. However, these useful functions of ROS can be demonstrated while the cell detoxifies excess ROS. In case of disruption of the detoxification system, as well as in case of significant and prolonged abiotic stress, excess ROS is extremely toxic for the cell, leading to the destruction of biomolecules and cell death. Thus, ROS molecules are important molecules regulating metabolism and triggering signals for acclimation processes in response to abiotic stress.
6. Conclusion
Abiotic stresses, both climate change and intense, impede plant growth and negatively affect crop yield and quality. To cope with the constant environmental impact, plants have developed a complex acclimation system. The acclimation system is triggered by a cascade of signaling reactions. ROS formation in plants is a natural metabolic process. ROS play both positive and negative roles. At low concentrations, ROS are signaling molecules that activate proliferation-differentiation processes. During abiotic stress, ROS production is impaired, which leads to disruption of ROS metabolic and signaling pathways. The steady-state level of ROS and the redox state of the plant cell differ depending on the type of abiotic stress the plant faces. It follows that different environmental conditions lead to the formation of a specific set of subcellular ROS and redox signature, which in turn leads to the activation of an acclimation response adapted to them. Thus, ROS is an essential molecule. signaling about abiotic stress and triggering the acclimation process. At the site of exposure to the stressor, ROS are produced, which trigger a wave of ROS that spreads at a tremendous speed throughout the plant. The ROS wave is used for signaling and triggering the mechanisms of plant adaptation to abiotic stress. As a result of ROS wave signaling, transcriptomic and metabolomic reprogramming of cells occurs.
However, the processes of ROS interaction with other molecules, signal transduction mechanisms, detection of signaling cascades, participation of ROS in metabolic processes, regulation of genes involved in the processes of plant acclimation to various types of abiotic stress are complex and require further research.