2.1. Materials
(S)-(+)-Camptothecin ((S)-4-Ethyl-4-hydroxy-1H-pyrano-[3′,4′:6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione) (CPT) (purity: >97.0% (HPLC)) was purchased from TCI Europe N.V. (Zwijndrecht, Belgium). PAMAM dendrimer, ethylenediamine core, generation 4.0, 10 wt.% solution in methanol was obtained from Merck, Poznan, Poland. L-lactide ((3S)-cis-3,6-dimethyl-1,4-dioxane-2,5-dione) (LA) (purity: 100%), -caprolactone (2-oxepanone) (CL) (purity: 100%), glycolide (1,4-dioxane-2,5-dione) (GL) (purity: 100%), diethylzinc solution 1.0 M in hexanes (Et2Zn), poly(ethylene glycol) average Mn 400 (PEG-400), Tween® 80 (polyethylene glycol sorbitan monooleate, polysorbate 80) were also obtained from Merck, Poznan, Poland. N,N-dimethylformamide (DMF, anhydrous, 99%, Avantor Performance Materials S.A., Gliwice, Poland), dimethyl sulphoxide (DMSO, anhydrous, 99%, Avantor Performance Materials S.A., Gliwice, Poland), methanol (anhydrous, 99.9%, Avantor Performance Materials S.A., Gliwice, Poland), dichloromethane (DCM, anhydrous, 99.8%, Chempur, Piekary Śląskie), chloroform (pure, stabilized with amylen, 98.5%, Chempur, Piekary Śląskie, Poland), petroleum ether boiling range 6090°C (Chempur, Piekary Śląskie, Poland), liquid paraffin (Chempur, Piekary Śląskie, Poland), hydrochloric acid (37%, Merck, Poznan, Poland) and acetonitrile ((ACN), anhydrous, 99.8%, Avantor Performance Materials S.A., Gliwice, Poland) were used as received. Dimethyl-d6-sulfoxide (DMSO-d6) in ampoules, for NMR measurements (99.9 atom% D), was purchased from ARMAR Chemicals (Döttingen, Switzerland), whereas chloroform-d (deuterochloroform, CDCl3 99.8 atom% D) was purchased from Merck, Poznan, Poland. Phosphate buffer solutions (PBS, pH 7.40 ± 0.05 and pH 6.50 ± 0.05, 20°C, Avantor Performance Materials S.A., Gliwice, Poland) were also used as received.
2.2. Synthesis of PAMAM Dendrimer/CPT Complex
The synthesis was carried out according to a previously established method by Oledzka et al. [
34]. Briefly, 9.1 mg of CPT was placed in a 5.0 mL round-bottom flask and dissolved in 2 mL of DMF. Then, 1 mL of PAMAM dendrimer (G4, 10 wt.% in methanol) was added, and the prepared reaction mixture was incubated in the dark for 24 h at 37°C, at rotational speed of 130 rpm. Following that, the DMF was evaporated, and 2.0 mL of distilled water was added to the solid residue and stirred for 1 h in order to remove the unreacted CPT. The obtained suspension was filtered using a 0.45
μm syringe filter, and the supernatant was evaporated using a rotary evaporator. The resulting solid compound was dried in a vacuum oven at 40°C for 72 h, until the constant weight was achieved. The PAMAM dendrimer/CPT complex synthesis yielded 84.85%. The synthesised complex was stored in the dark in an inert gas atmosphere until it was used. Subsequent analyses were conducted within 24 h of synthesis.
The
1H NMR spectrum of the synthesized PAMAM dendrimer/CPT complex (DMSO-d
6, 400 MHz; δH): 8.69 ppm (G, B-ring of CPT), 7.93 ppm (H and K, A-ring of CPT), 7.70 ppm (I and J, A-ring of CPT), 7.34 ppm (A, D-ring of CPT), 5.42 ppm (E, E-ring of CPT), 5.29 ppm (F, C-ring of CPT), 4.87 ppm (6 (-CH
2-CH
2-C(O)-N(
H)-) of PAMAM dendrimer), 4.67 ppm (7 (-C(O)-N(H)-CH
2-CH
2-N
H2) of PAMAM dendrimer), 2.00 – 3.62 ppm (2 (-C
H2-CH
2-C(O)-N(H)-), 3 (-CH
2-C
H2-C(O)-N(H)-), 4 (-C(O)-N(H)-C
H2-CH
2-) and 5 (-C(O)-N(H)-CH
2-C
H2-NH
2) of PAMAM dendrimer), 1.86 ppm (B, E-ring of CPT, methylene group), 1.22 ppm (1 (-N-C
H2-C
H2-N-) and 1’ (-C(O)-N(H)-CH
2-C
H2-) of PAMAM dendrimer), 0.87 ppm (C, E-ring of CPT, methylene group) (
Figure S1, Supplementary Materials).
2.3. Synthesis of Biodegradable Polymers
The Ring-Opening Polymerisation (ROP) process was applied to produce four polymers, with ZnEt2 acting as a catalyst and PEG-400 serving as a co-initiator. The reactions were carried out in a bulk. Briefly, carefully weighted amounts of monomers - LA (M1), LA and CL (M2), CL and GL (M3, M4) (1 g total) - were placed in glass ampoules and vacuum dried to remove trace amounts of moisture. After that, calculated amounts of ZnEt2 and PEG-400 were added in an argon atmosphere via the Schlenk line, and the ampoules were safely sealed. Reactions were carried out in an oil bath at 130°C for 24 h. The post-reaction mixtures of M1 and M2 were then dissolved in 6.0 mL of DCM, while M3 and M4 were dissolved in 6.0 mL of a 1:1 mixture consisting of DCM and chloroform. Following that, the dissolved polymers were transferred to beakers and precipitated using an ice-cold 5% HCl solution in methanol. The precipitates were subsequently washed twice more with pure, ice-cold methanol. The collected products were vacuum-dried for 24 h at 30°C.
The
1H NMR spectrum of the synthesized PLLA (M1, CDCl
3, 400 MHz; δH): 5.15 ppm (2, (-O(O)C-(
H)C(CH
3)-)), 4.31 ppm (5, (-O(O)C-(
H)C(CH
3)-OH)), 3.63 ppm (PEG, (-C
H2-C
H2-)), 2.17 ppm (1, (-O(O)C-(H)C(CH
3)-O
H)), 1.42 ppm (3, (-O(O)C-(H)C(C
H3)-)), 1.25 ppm (4, (-O(O)C-(H)C(C
H3)-OH)) (
Figure S2, Supplementary Materials).
The
13C NMR spectrum of the synthesized PLLA (M1, CDCl
3, 400 MHz; δH): 169.7 ppm (-O(O)
C-(H)C(CH
3)-), 69.0 ppm (-O(O)C-(H)
C(CH
3)-), 16.7 ppm (2, (-O(O)C-(H)C(
CH
3)-)) (
Figure S3, Supplementary Materials).
The
1H NMR spectrum of the synthesized PLACL (M2, CDCl
3, 400 MHz; δH): 5.15 ppm (2, (-O(O)C-(
H)C(CH
3)-)), 5.06 ppm (3, (-O-(
H)C(CH
3)-C(O)O-(CH
2)
5-)), 4.12 ppm (5, (-(H)C(CH
3)-C(O)O-C
H2-CH
2-CH
2-CH
2-CH
2-C(O)O-)), 4.05 ppm (10, (-(CH
2)
5-C(O)O-C
H2-CH
2-CH
2-CH
2-CH
2-)), 3.64 ppm (PEG, (-C
H2-C
H2-)), 2.38 ppm (9, (-(H)C(CH
3)-C(O)O-CH
2-CH
2-CH
2-CH
2-C
H2-C(O)O-)), 2.29 ppm (14, (-(CH
2)
5-C(O)O-CH
2-CH
2-CH
2-CH
2-C
H2-)), 1.45 - 1.71 ppm (1, (-O(O)C-(H)C(C
H3)-), 4, (-O-(H)C(C
H3)-C(O)O-(CH
2)
5-), 6, (-(H)C(CH
3)-C(O)O-CH
2-C
H2-CH
2-CH
2-CH
2-C(O)O-), 8, (-(H)C(CH
3)-C(O)O-CH
2-CH
2-CH
2-C
H2-CH
2-C(O)O-), 11, (-(CH
2)
5-C(O)O-CH
2-C
H2-CH
2-CH
2-CH
2-), 13 (-(CH
2)
5-C(O)O-CH
2-CH
2-CH
2-C
H2-CH
2-)), 1.39 ppm (7, (-(H)C(CH
3)-C(O)O-CH
2-CH
2-C
H2-CH
2-CH
2-C(O)O-), 12, (-(CH
2)
5-C(O)O-CH
2-CH
2-C
H2-CH
2-CH
2-)) (
Figure S4, Supplementary Materials).
The
13C NMR spectrum of the synthesized PLACL (M2, CDCl
3, 400 MHz; δH): 172.6 – 173.9 ppm (1, (-(CH
2)
5-
C(O)O-(CH
2)
5-), carbonyl carbon atoms of oxycaproyl unit), 169.3 – 171.2 ppm (2, (-O(O)
C-(H)C(CH
3)-), carbonyl carbon atoms of lactidyl unit), 67.8 – 69.9 ppm (4, (-O(O)C-(H)
C(CH
3)-), methine carbon atoms of lactidyl unit), 63.4 – 65.9 ppm (9, (-C(O)O-CH
2-CH
2-CH
2-CH
2-
CH
2-),
-carbon atoms of oxycaproyl unit), 33.1 – 33.4 ppm (5, (-C(O)O-
CH
2-CH
2-CH
2-CH
2-CH
2-),
-carbon atoms of oxycaproyl unit)), 28.2 ppm (8, (-C(O)O-CH
2-CH
2-CH
2-
CH
2-CH
2-),
-carbon atoms of oxycaproyl unit), 23.9 – 25.9 ppm (6, (-C(O)O-CH
2-
CH
2-CH
2-CH
2-CH
2-),
-carbon atoms of oxycaproyl unit, 7, (-C(O)O-CH
2-CH
2-
CH
2-CH
2-CH
2-),
-carbon atoms of oxycaproyl unit), 16.6 ppm (3, (-O(O)C-(H)C(
CH
3)-), methyl carbon atoms of lactidyl unit) (
Figure S5, Supplementary Materials).
The
1H NMR spectrum of the synthesized PGACL (M3 and M4, CDCl
3, 400 MHz; δH): 4.60 ppm (1, (-O-C
H2-C(O)-), glycolidyl unit), 4.05 ppm (2, (-C(O)O-C
H2-CH
2-CH
2-CH
2-CH
2-), caproyl unit), 3.65 ppm (PEG, (-C
H2-C
H2-)), 2.30 ppm (6, (-C(O)O-CH
2-CH
2-CH
2-CH
2-C
H2-), caproyl unit), 1.65 ppm (6, (-C(O)O-CH
2-C
H2-CH
2-CH
2-CH
2-), caproyl unit, 5, (6, (-C(O)O-CH
2-CH
2-CH
2-C
H2-CH
2-), caproyl unit), 1.38 ppm (4, (-C(O)O-CH
2-CH
2-C
H2-CH
2-CH
2-), caproyl unit) (
Figure S6, Supplementary Materials).
The
13C NMR spectrum of the synthesized PGACL (M3 and M4, CDCl
3, 400 MHz; δH): 172.8 – 173.5 ppm ((-O-CH
2-
C(O)-), glycolidyl unit), 167.9 ppm ((-
C(O)O-CH
2-CH
2-CH
2-CH
2-CH
2-), caproyl unit), 64.2 – 65.2 ppm ((-C(O)O-CH
2-CH
2-CH
2-CH
2-
CH
2-),
-carbon atoms of oxycaproyl unit), 60.2 – 60.5 ppm ((-O-
CH
2-C(O)-), glycolidyl unit), 33.6 – 34.1 ppm ((-C(O)O-
CH
2-CH
2-CH
2-CH
2-CH
2-),
-carbon atoms of oxycaproyl unit)), 28.2 ppm ((-C(O)O-CH
2-CH
2-CH
2-
CH
2-CH
2-),
-carbon atoms of oxycaproyl unit), 25.4 ppm ((-C(O)O-CH
2-CH
2-
CH
2-CH
2-CH
2-),
-carbon atoms of oxycaproyl unit), 24.4 ppm ((-C(O)O-CH
2-
CH
2-CH
2-CH
2-CH
2-),
-carbon atoms of oxycaproyl unit) (
Figure S7, Supplementary Materials).
The conversion of monomers was determined from
1H NMR spectra of post-reaction, by comparing the integrated signals of equivalent protons from the monomer and polymer, according to the following formula (Equation 1):
where
Ii and
II represent the integral intensities of signals from equivalent protons in the monomer and polymer, respectively.
The microstructural analysis of the obtained polymers was carried out with
13C NMR spectra in the methine and carbonyl regions for PLLA and the carbonyl region for PLACL. The microstructure of PGACL matrices was examined using
1H NMR spectra in the region of methylene protons of glycolidyl units (
GG) and
-methylene proton region of caproyl units (
Cap). By comparison with the available literature, relevant spectral lines were assigned to the respective sequences [
35,
36,
37].
With the use of
1H and
13C spectra, the experimental lengths of glycolidyl units (
LeGG) and lactydyl units (
LeLL) were calculated according to Equation (2), whereas experimental lengths of caproyl units were calculated with the use of Equation (3) for
1H NMR spectrum and Equation (4) for
13C NMR spectrum, respectively:
where X represents lactydyl unit -OCH(CH
3)CO- (
L) or glycolidyl unit -OCH
2CO- (
G),
Cap represents caproyl unit -O(CH
2)
5CO-, and
CapXX,
CapXCap,
XCap,
CapCapX, and so on represent particular sequences in the polymeric chain.
The transesterification of the second mode (
TII) may cause break in the
L or
G units within the copolymeric chain, resulting in the formation of distinct
CapLCap or
CapGCap sequences. To quantitatively determine the yield of
TII in the copolymeric chains following Equation (5) was applied:
where [
CapXCap] represents the experimental concentration of
CapXCap sequences, whereas [
CapXCap]
R is the concentration of
CapXCap sequences in a completely random copolymeric chain.
The [
CapXCap]
R can be described using following formula (Equation 6), where the ratio of [Cap]/[X] is denoted as k’:
The degree of the randomness (
R) of the copolymeric chain was calculated according to the Equation 7:
where L
RXX represents the average lengths of lactydyl or glycolidyl blocks (Equation 8) and caproyl blocks (Equation 9) respectively, in a completely randomized copolymeric chain.
2.11. Molecular Modelling of the Nanosystems Composed of PAMAM Dendrimer/CPT Complex and Biodegradable Polymer
The structure of PAMAM dendrimer generation 4.0 was built using the Build Polymers module within the Biovia Materials Studio 2020 software suite (
https://www.3ds.com/products-services/biovia/products/molecular-modeling-simulation/biovia-materials-studio/, accessed on 20 October 2024). The terminal, primary amino groups of dendrimers are demonstrated to be protonated and thereby positively charged at pH ranges between 6.5 ± 0.05 and 9.0 ± 0.05 [
43]. Since the dissolution analyses conducted for this study were done at pH 6.5 ± 0.05 and 7.4 ± 0.05, all of the terminal amino groups of the modeled PAMAM structure have been protonated to improve comparability with those studies.
The Forcite Plus module has been used to optimize the structures, applying ultra-fine quality settings of geometry optimization and smart algorithm. The convergence tolerance values were set to 2 · 10
-5 kcal/mol for energy, 1 · 10
-3 kcal/(Å · mol) for force and 1 · 10
-5 Å for displacement, with 5 · 10
4 maximum iterations. All calculations have been performed using the COMPASS II forcefield [
44], which has been shown to provide accurate results when modeling PAMAM dendrimers [
45]. As charge assignments are one of the characteristics provided in this forcefield specification, the charges have been allocated using the COMPASS II forcefield. The electrostatic and van der Waals summation methods were both atoms based with cubic spline truncation of non-bond energy terms, 18.5 Å cutoff distance, 1 Å spline width and 0.5 Å buffer width.
Molecular docking calculations were performed using the Adsorption Locator module within the Biovia Materials Studio 2020 software suite. The Adsorption Locator module identifies possible adsorption sites by carrying out Monte Carlo searches of the configurational space of the substrate (PAMAM) – adsorbate (CPT) system as the temperature is slowly decreased within the simulated annealing process of a molecular dynamics run. The benefit of such an approach is that it enables simultaneous docking of the specified numbers of CPT, in this work 3 molecules of API. The Adsorption Locator makes use of a simulation of annealing with geometry adjustments in between repeating heat-cool cycles. For repeatable results, 10 cycles with 100 000 steps each and annealing temperatures ranging from 100 to 5000 K were utilized. For "conformer," "rotate," and "translate," the Monte Carlo parameters were set to a probability of 0.32 (ratio = 1), whereas "regrow" was set to 0.1 (ratio = 0.03). The computations employed the identical geometry optimization parameters from the preceding paragraph's detailed description of geometry optimization and the COMPASS II force field.
To calculate the stoichiometry of the PAMAM dendrimer/CPT complex, the formula below has been used (Equation 17):
where L is the loading (average number of CPT molecules per one PAMAM molecule), m
CPT is the mass of added CPT (9.1 · 10
-3 g), M
PAMAM is the molar mass of PAMAM (14214.17 g/mol), EE is the encapsulation efficiency (84.85%), M
CPT is the molar mass of CPT (348.35 g/mol), V
PAMAM is the volume of added PAMAM methanol solution (1 · 10
-3 dm
3), d
PAMAM is the density of the PAMAM methanol solution (0.813 g/cm
3) and C
PAMAM is the percentage concentration of PAMAM methanol solution (10%).
The optimized systems containing three molecules of CPT were then subjected to molecular dynamics (MD) simulations under periodic boundary conditions. First, the MODELS 1-4 were created using the Amorphous Cell module of Materials Studio. This application provides a comprehensive set of tools to construct three-dimensional periodic structures of polymeric systems. The module builds molecules in a cell in a Monte Carlo fashion, by minimizing close contacts between atoms, whilst ensuring a realistic distribution of torsion angles for any given forcefield. The output of such simulations is a single periodic structure, which in the case of present study served as the basic input to MD simulations. The composition of the cubic unit cells of MODELS 1-4 included PAMAM G4.0/3 molecules of CPT complex, surrounded by the polymer as defined in Table 5. After construction, the systems MODELS 1-4 were subjected to geometry optimization, including unit cell dimensions optimization, using the parameters from the preceding paragraph's detailed description of geometry optimization setup and the COMPASS II force field as well.
Subsequently, a simulated annealing process was undertaken in 5 cycles of 10 000 steps, within a temperature range of 300-500 K, using the NVT ensemble mode, 5 heating ramps per cycle, 100 dynamics steps per run and the Berendsen thermostat with 0.1 ps decay constant. A longer (100 ns) production run, in NVT mode, with the Nosé-Hoover thermostat for temperature control with a Q-ratio of 2 was performed with a 1 fs time step. For the MD calculations, the COMPASS II force field was used with the parameters the same as those used for geometry optimization.
2.12. Measurements
All 1H and 13C NMR measurements were performed using a Varian 300 MHz (Palo Alto, Santa Clara, CA, USA) and Agilent Technologies 400 MHz (Santa Clara, CA, USA) spectrometer.
The quantitative analysis of CPT content in the samples was determined using previously developed and described method by Oledzka et al. [
34]. The HPLC apparatus (Beckman Coulter, Miami, Florida USA) was equipped with an autosampler (Triathlon 900, Spark Holland B.V., Emmen, Netherlands), pump (Beckman Coulter System Gold
® 125NM Solvent Module, Fullerton, CA, USA), and UV/Vis detector (Beckman Coulter System Gold
® 166, Fullerton, CA, USA). The analysis was performed at 363 nm using C18 column (Luna 25 cm, 5 μm, 100 A, Phenomenex, Basel, Switzerland) using a gradient mobile phase of acetonitrile (ACN) : phosphate buffer solution (pH 6.50 ± 0.05 or 7.40 ± 0.05) (
v/
v), delivered at a flow rate of 1.0 mL/min (ACN concentration varied with time: 5% ACN after 0 min, 15% ACN after 5 min, 35% ACN after 15 min, 50% ACN after 20 min, and 5% ACN after 22 and 25 min). The column was placed at 30◦C, and the injection volume was 20 μL. The retention time of CPT was 13.90 ± 0.1 min for carboxylic form of CPT and 20.69 ± 0.1 min for the lactone form.
The number-average molecular weight (Mn) and dispersity index (Ð) of the obtained polymers were measured by SEC-MALLS instrument (Wyatt Technology Corporation, Santa Barbara, CA, USA), composed of an 1100 Agilent isocratic pump, autosampler, degasser, thermostatic box for columns, a photometer MALLS DAWN EOS (Wyatt Technology Corporation, Santa Barbara, CA, USA) and differential refractometer Optilab Rex (Wyatt Technology Corporation, Santa Barbara, CA, USA). ASTRA 4.90.07 software (Wyatt Technology Corporation, Santa Barbara, CA, USA) was used for data collecting and processing. Two 2 x PLGel 5 microns MIXED-C columns were used for separation. The samples were injected as a solution in methylene chloride. The volume of the injection loop was 100 mL. Methylene chloride was used as a mobile phase at a flow rate of 0.8 mL/min.
Zetasizer Nano ZS (Malvern, UK) was applied for dynamic light scattering mea- surements of hydrodynamic diameters and zeta potential. Excitation wavelength of DLS instrument was 633 nm (He-Ne laser, power = 5 W) and measurement angle was 173. Polystyrene disposable cuvettes were used during hydrodynamic diameter determination. Measurements were conducted at 25◦C in aqueous solutions. Samples were briefly sonicated before measurement. Zeta potential was measured using standard dip cell for zeta potential measurements equipped with palladium electrodes. All experiments were conducted in three replications.
The transmission electron microscopy (TEM) has been used to assess the shape morphology and size of the developed nanosystems. The developed products that had been synthesized were collected on TEM grids. TEM studies were carried out using equipment installed in the Laborarory of Electron Microscopy, Nencki Institute of Experimental Biology, Polish Academy of Sciences, Warsaw, Poland. Electron micrographs were taken using a CCD MORADA G2 (EMSIS GmBH, Germany) camera on a JEM 1400 (JEOL Co., Japan) transmission electron microscope sponsored by the EU Structural Funds: Centre of Advanced Technology BIM – Equipment purchase for the Laboratory of Biological and Medical Imaging.
Concerning confocal fluorescence microscopy, the samples were mounted (Chemland, Stargard, Poland) and sealed with #1.5 coverslips (Epredia, Braunschweig, Germany). The fluorescent signal was acquired with an Olympus Fluoview FV1000 confocal microscope (EVIDENT Europe GmbH, Hamburg, Germany) and with 10x and 60x objectives. Fluorescence was excited with 488 nm line of an Argon laser and the emission was detected at 461 nm.