REVIEW
|
doi:10.20944/preprints202209.0327.v1
Subject:
Medicine And Pharmacology,
Neuroscience And Neurology
Keywords:
scRNA-seq; bioinformatics; subpopulations; analysis methods; single-cell RNA sequencing
Online: 21 September 2022 (11:22:50 CEST)
REVIEW
|
doi:10.20944/preprints202110.0185.v1
Subject:
Computer Science And Mathematics,
Mathematical And Computational Biology
Keywords:
systems biology; integrative bioinformatics; interactomics; eukaryotes; non-models; network biology
Online: 12 October 2021 (14:24:56 CEST)
ARTICLE
|
doi:10.20944/preprints202010.0543.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
HSPA5; GRP78; BiP; HCV E2; protein-protein docking; structural bioinformatics
Online: 27 October 2020 (09:11:13 CET)
ARTICLE
|
doi:10.20944/preprints202010.0145.v1
Subject:
Medicine And Pharmacology,
Immunology And Allergy
Keywords:
Parkinson’s disease; Periodontitis; Periodontal disease; Mendelian Randomization; Bioinformatics; Oral Health
Online: 7 October 2020 (08:26:14 CEST)
REVIEW
|
doi:10.20944/preprints202005.0376.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
virus bioinformatics; SARS-CoV-2; sequencing; epidemiology; drug design; tools
Online: 23 May 2020 (11:01:11 CEST)
ARTICLE
|
doi:10.20944/preprints202407.0837.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Bacterial pathogenicity; Genomic metadata analysis; Bioinformatics; Microbiology research; Public health surveillance
Online: 11 July 2024 (00:01:42 CEST)
ARTICLE
|
doi:10.20944/preprints202404.1312.v1
Subject:
Biology And Life Sciences,
Other
Keywords:
transcription factors; gene regulatory networks; bioinformatics; TF-target prediction; Shiny app
Online: 19 April 2024 (12:03:32 CEST)
ARTICLE
|
doi:10.20944/preprints202402.0171.v1
Subject:
Biology And Life Sciences,
Food Science And Technology
Keywords:
lipid oxidation; surface plasmon resonance; bioinformatics; peptidomics; emulsion; protein hydrolysate; EDTA
Online: 2 February 2024 (13:01:22 CET)
ARTICLE
|
doi:10.20944/preprints202306.2207.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
Bovine; Bioinformatics; Phospholipase D family member 6; Testes; Spermatogonial stem cells
Online: 30 June 2023 (14:45:51 CEST)
ARTICLE
|
doi:10.20944/preprints202210.0317.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Bioinformatics; Biotic stresses; Regulatory mechanisms; Protein structure; Gene expression; Evolution analysis
Online: 21 October 2022 (03:37:45 CEST)
REVIEW
|
doi:10.20944/preprints202106.0145.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Repetitive element; Transposable element; Non-coding RNA; ncRNA; Functional element; Bioinformatics
Online: 4 June 2021 (15:33:17 CEST)
SHORT NOTE
|
doi:10.20944/preprints202106.0121.v1
Subject:
Biology And Life Sciences,
Anatomy And Physiology
Keywords:
SARS-CoV-2 origin; Furin Cleavage Site; Arginine Codon Usage; Bioinformatics
Online: 4 June 2021 (08:00:03 CEST)
ARTICLE
|
doi:10.20944/preprints202009.0019.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
mass spectrometry; OSMAC approach; natural products; silent BGC activation; bioinformatics; screening
Online: 23 December 2020 (11:19:38 CET)
REVIEW
|
doi:10.20944/preprints202007.0478.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Bioinformatics; Drug Design; Small Organic Molecule; Target identification; Web-based Server
Online: 25 July 2020 (17:50:30 CEST)
BRIEF REPORT
|
doi:10.20944/preprints202004.0476.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
androgen insensitivity syndrome; androgen receptor; ligand binding domain; pathogenic mutation; bioinformatics
Online: 27 April 2020 (03:59:38 CEST)
ARTICLE
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
soybean (Glycine max L.); NPQ; photoinhibition; bioinformatics; subcellular localization; qRT-PCR
Online: 10 February 2020 (09:47:05 CET)
ARTICLE
|
doi:10.20944/preprints202408.0105.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
Cancer Stem Cell; Bioinformatics; Breast cancer; Lung adenocarcinoma; Ovarian cancer; Cancer biomarker
Online: 2 August 2024 (00:15:54 CEST)
ARTICLE
|
doi:10.20944/preprints202311.0653.v1
Subject:
Medicine And Pharmacology,
Pharmacology And Toxicology
Keywords:
Cytochrome P450 oxidoreductase; POR; gnomAD, CAH; drug metabolism, steroid hormones; SNV; bioinformatics
Online: 9 November 2023 (15:09:12 CET)
ARTICLE
|
doi:10.20944/preprints202310.0903.v1
Subject:
Medicine And Pharmacology,
Anesthesiology And Pain Medicine
Keywords:
Gabapentin; Arterial Blood Pressure; Heart Rate; Left Ventricular Function; Proteomics; Bioinformatics; Calmodulin;
Online: 13 October 2023 (12:41:55 CEST)
ARTICLE
|
doi:10.20944/preprints202308.1098.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Transcriptional meta-analysis; molecular docking; RT-qPCR; Bioinformatics; Structural-based virtual screening
Online: 15 August 2023 (11:47:28 CEST)
BRIEF REPORT
|
doi:10.20944/preprints202109.0349.v1
Subject:
Medicine And Pharmacology,
Gastroenterology And Hepatology
Keywords:
RNA-Seq; bioinformatics; web application; gene expression; alternative splicing; visualization; molecular epidemiology
Online: 20 September 2021 (16:56:32 CEST)
REVIEW
|
doi:10.20944/preprints202105.0346.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
drug discovery; drug repurposing; bioinformatics; machine learning; artificial intelligence; biomedical discoveries etc.
Online: 14 May 2021 (15:17:50 CEST)
REVIEW
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
data science; reuse; sequencing data; genomics; bioinformatics; databases; computational biology; open science
Online: 16 July 2020 (12:39:43 CEST)
ARTICLE
|
doi:10.20944/preprints202007.0289.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
chickens; IGF-1 gene; TGFβ2 gene; DNA extraction; purification; sequencing and bioinformatics
Online: 14 July 2020 (05:17:40 CEST)
ARTICLE
|
doi:10.20944/preprints201907.0018.v1
Subject:
Medicine And Pharmacology,
Dermatology
Keywords:
atopic dermatitis; AD; dermatology; target identification; pathway identification; bioinformatics; protein-protein networks
Online: 1 July 2019 (12:47:49 CEST)
ARTICLE
|
doi:10.20944/preprints201610.0025.v1
Subject:
Medicine And Pharmacology,
Other
Keywords:
drug repurposing; translational bioinformatics; transcriptomics; transcriptome analysis; drug discovery; protocol; gene expression
Online: 9 October 2016 (08:42:23 CEST)
ARTICLE
|
doi:10.20944/preprints202408.0218.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
α-amylases of industrial importance; bioinformatics; extracellular expression; fermentation; catalytic properties; starch hydrolysis
Online: 4 August 2024 (23:36:32 CEST)
REVIEW
|
doi:10.20944/preprints202206.0022.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
SARS-CoV-2; COVID-19; Omicron; bioinformatics; immune escape; RBD mutations; vaccine development
Online: 1 June 2022 (14:12:36 CEST)
ARTICLE
|
doi:10.20944/preprints202406.0172.v1
Subject:
Medicine And Pharmacology,
Neuroscience And Neurology
Keywords:
neuropsychiatry; severe mental illnesses; schizophrenia; bipolar disorder; major depressive disorder; bioenergetics; ketogenic; transcriptomic; bioinformatics
Online: 5 June 2024 (03:31:05 CEST)
ARTICLE
|
doi:10.20944/preprints202405.0971.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
virus detection; next-generation sequencing; bioinformatics analysis; SNP discovery; viral genomics; AI-assisted genomics
Online: 14 May 2024 (13:26:57 CEST)
REVIEW
|
doi:10.20944/preprints202306.0042.v1
Subject:
Computer Science And Mathematics,
Artificial Intelligence And Machine Learning
Keywords:
machine learning; artificial intelligence; bioinformatics; cancer biology; neural networks; sym-metry; group theory; algorithms
Online: 1 June 2023 (07:12:16 CEST)
ARTICLE
|
doi:10.20944/preprints202111.0004.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
m1A; Tumor microenvironment; PD-1/PD-L1; CTLA-4; Tumor Mutation Burden; Bioinformatics Analysis
Online: 1 November 2021 (10:39:51 CET)
REVIEW
|
doi:10.20944/preprints202407.0415.v1
Subject:
Biology And Life Sciences,
Other
Keywords:
Polyploids; homeologs; allopolyploidization; RNA-sequencing; gene expression; expression level dominance; homoeolog expression bias; additivity; bioinformatics
Online: 4 July 2024 (08:58:08 CEST)
ARTICLE
|
doi:10.20944/preprints202001.0274.v1
Subject:
Computer Science And Mathematics,
Mathematical And Computational Biology
Keywords:
bioinformatics; computational genomics; computational medicine; data science; data visualization; parallel processing; grid computing; fog computing
Online: 24 January 2020 (10:26:26 CET)
ARTICLE
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
artificial intelligence; bioinformatics; computational biology; data mining & machine learning; evolutionary studies; mathematical biology; animal behavior
Online: 6 November 2019 (05:07:24 CET)
REVIEW
|
doi:10.20944/preprints202405.0601.v1
Subject:
Biology And Life Sciences,
Life Sciences
Keywords:
Data science; Big data; Data mining; Bioinformatics; Chemometric; Medicinal chemistry; Targets; Knowledge discovery; Artificial intelligence, Machine learning, Deep learning; Data integration; Metadata, Database; QSAR; Collaborative drug discovery; Structure-based drug design; Ligand-based drug discovery; Clinical trials; Product development.
Online: 10 May 2024 (10:15:20 CEST)
REVIEW
|
doi:10.20944/preprints202403.0467.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
circulating cell-free DNA (ccfDNA); molecular diagnostics; liquid biopsies; cancer biomarkers; genomic sequencing; bioinformatics; personalized medicine
Online: 8 March 2024 (04:28:18 CET)
REVIEW
|
doi:10.20944/preprints202403.0103.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
DNA; genomics; sequencing; gene regulation; precision medicine; DNA nanotechnology; bioinformatics; CRISPR-Cas9; gene editing; personalized Medicine
Online: 4 March 2024 (09:54:47 CET)
ARTICLE
|
doi:10.20944/preprints202208.0241.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Tyr-FISH; integration genetic; cytogenetic and pseudochromosome maps; transcript based markers; genome assembly; bioinformatics; Allium cepa
Online: 12 August 2022 (12:54:02 CEST)
ARTICLE
|
doi:10.20944/preprints202203.0110.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
benchmarking; bioinformatics; defective viral genomes; gradient boosting; machine learning; RNA-seq; SARS-CoV-2; virus replication
Online: 7 March 2022 (16:25:18 CET)
BRIEF REPORT
|
doi:10.20944/preprints202110.0080.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
SARS-CoV-2; MERS-CoV; arginine dimer; polybasic furin cleavage site; aginine codon; Markov model; bioinformatics
Online: 14 October 2021 (13:08:25 CEST)
REVIEW
|
doi:10.20944/preprints201911.0252.v1
Subject:
Biology And Life Sciences,
Ecology, Evolution, Behavior And Systematics
Keywords:
data; sequence; information; entropy; genome; gene; proteins; time-series; modeling; meta-genomics; transcriptomics; proteomics; bioinformatics; DNA
Online: 22 November 2019 (02:28:15 CET)
REVIEW
|
doi:10.20944/preprints201911.0085.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
mendelian disease; diagnostics; variant interpretation; variant prioritization; rna splicing; bioinformatics; machine learning; genomic medicine; effect prediction
Online: 8 November 2019 (04:07:16 CET)
ARTICLE
|
doi:10.20944/preprints201907.0051.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
lung cancer; molecular signature; molecular pathway; differentially expressed genes; protein-protein interaction; reporter biomolecules and bioinformatics
Online: 3 July 2019 (08:54:37 CEST)
ARTICLE
|
doi:10.20944/preprints201808.0423.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
mitochondrial DNA; mitochondrial genome; genome assembly; genome annotation; next generation sequencing; animal genomics; partial genomics; bioinformatics
Online: 24 August 2018 (03:24:37 CEST)
REVIEW
|
doi:10.20944/preprints202401.0789.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
systems microbiology; microbial ecology; omics data integration; metaproteomics; genome-scale modeling; constraint-based modeling; boolean modeling, bioinformatics
Online: 10 January 2024 (09:57:55 CET)
COMMUNICATION
|
doi:10.20944/preprints202211.0165.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Proteomics; LC-MS/MS; phosphopeptide enrichment; bioinformatics; cellular signaling; Mag-naporthe oryzae; phosphorylation; DDA; DIA; phospho-peptidomics
Online: 9 November 2022 (02:09:17 CET)
ARTICLE
|
doi:10.20944/preprints202104.0475.v1
Subject:
Medicine And Pharmacology,
Immunology And Allergy
Keywords:
drug repurposing; virtual screening; multiscale; multitargeting; polypharmacology; computational biology; drug repositioning; structural bioinformatics; molecular docking; proteomic signature
Online: 19 April 2021 (12:22:05 CEST)
ARTICLE
|
doi:10.20944/preprints201811.0183.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
sequencing technologies; NGS; genome research; genome assembly; variant calling; RNA-Seq; transcriptome assembly; bioinformatics; molecular biology; education
Online: 13 November 2018 (10:22:06 CET)
ARTICLE
|
doi:10.20944/preprints201804.0339.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
myocardial infarction; heart attack; gene set enrichment analysis; protein-protein interaction network; bioinformatics; systems biology; in silico study
Online: 26 April 2018 (10:22:31 CEST)
REVIEW
|
doi:10.20944/preprints202306.1487.v1
Subject:
Medicine And Pharmacology,
Pathology And Pathobiology
Keywords:
cell-free nucleic acids; cell-free DNA; circular DNA; microvescicles; inflammatory bowel disease; cGAS-STING; TLR9; oligonucleotides; bioinformatics; molecular therapies.
Online: 21 June 2023 (08:55:03 CEST)
ARTICLE
|
doi:10.20944/preprints201811.0463.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Mass Spectroscopy, Bioinformatics, FGF14, Voltage Gated Channels, Schizophrenia, Alzheimer’s Disease, Sex-Specific Differences, Synaptic Plasticity, Cognitive Impairment, Excitatory/Inhibitory Tone
Online: 19 November 2018 (11:54:50 CET)
ARTICLE
|
doi:10.20944/preprints202404.0687.v1
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
Botrytis cinerea; secondary metabolism; polyketide synthase; non-ribosomal peptide synthetase; sesquiterpene cyclase; diterpene cyclase; dimethylallyltryptophan synthase; bioinformatics; fungal pathog
Online: 10 April 2024 (07:24:12 CEST)
REVIEW
|
doi:10.20944/preprints202307.0634.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
OSCC; oral cancer; genes; mutations; miRNA; expression; mir-34a; mir-155; mir-124; mir-1; mir-16; bioinformatics; in silico analysis
Online: 11 July 2023 (04:16:04 CEST)
ARTICLE
|
doi:10.20944/preprints202405.1848.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
bioinformatics; HBV; HIV-1; HPV; hybrid capture NGS; insertional mutagenesis; next generation sequencing; oncovirus; virus taxonomy; virus database; viral mapping; virus integration
Online: 28 May 2024 (11:55:16 CEST)
CONCEPT PAPER
|
doi:10.20944/preprints202104.0686.v1
Subject:
Biology And Life Sciences,
Anatomy And Physiology
Keywords:
H2O networks; Aqua biomolecule complexes; Thermodynamic mechanism; “Aquamoleculosome"; Entropic systems biology; Self-organized criticality (SOC); Self-organization triggering factor (SOTF); Bioinformatics of aquamoleculomics.
Online: 26 April 2021 (20:02:20 CEST)
ARTICLE
|
doi:10.20944/preprints202101.0441.v1
Subject:
Computer Science And Mathematics,
Algebra And Number Theory
Keywords:
Quantum Similarity; DNA; Molecular Biology; Meticodes; response variance; object set reference; Bioinformatics; Computational Physics; Computational Models; Mathematics; Probability; Statistics; Comparative Modeling; Biostatics; Biostatistics
Online: 22 January 2021 (11:35:18 CET)
ARTICLE
|
doi:10.20944/preprints202002.0097.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Protein structure and dynamics; Molecular structure and modeling; Protein and macromolecules; Computational methods and bioinformatics; Computer-based teaching tools; Learning materials and teaching tools; Multimedia teaching tools
Online: 7 February 2020 (11:42:09 CET)