ARTICLE
|
doi:10.20944/preprints202406.1937.v1
Subject:
Public Health And Healthcare,
Other
Keywords:
SARS-CoV-2; genomic epidemiology; genomic surveillance; recombination; whole-genome sequencing; California COVIDNet
Online: 27 June 2024 (11:03:23 CEST)
ARTICLE
|
doi:10.20944/preprints202406.1394.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
SARS-CoV-2; Genetic diversity; Whole genome sequencing; Phylogenetic tree; COVID-19; Transmission
Online: 21 June 2024 (05:04:45 CEST)
ARTICLE
|
doi:10.20944/preprints202406.0585.v1
Subject:
Biology And Life Sciences,
Ecology, Evolution, Behavior And Systematics
Keywords:
Habenaria; chloroplast genome; molecular marker; positive selection; Orchidaceae; phylogenomic
Online: 10 June 2024 (13:51:56 CEST)
ARTICLE
|
doi:10.20944/preprints202403.0244.v1
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
legumes; alfalfa; genomic selection; SNP calling pipeline; autotetraploidy; polyploidy; genome parametrization; SNP subsetting
Online: 5 March 2024 (10:25:28 CET)
ARTICLE
|
doi:10.20944/preprints202312.0701.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
Saccharomyces cerevisiae; genome editing; site-directed mutagenesis; CRISPR/Cas9; high-fidelity Cas9 forms
Online: 12 December 2023 (07:43:14 CET)
COMMUNICATION
|
doi:10.20944/preprints202311.0774.v1
Subject:
Biology And Life Sciences,
Neuroscience And Neurology
Keywords:
Ctenophora; Porifera; Placozoa; Cnidaria; nervous system evolution; neurotransmission; synapses; animal origins; genome; behavior
Online: 13 November 2023 (10:27:17 CET)
ARTICLE
|
doi:10.20944/preprints202309.1057.v1
Subject:
Medicine And Pharmacology,
Medicine And Pharmacology
Keywords:
vancomycin-resistant enterococcus faecium; hospital epidemic; whole genome analysis; infection prevention and control
Online: 15 September 2023 (11:41:52 CEST)
ARTICLE
|
doi:10.20944/preprints202308.0658.v1
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
Mungbean, Vigna, Whole genome sequence, SSR markers, Principal co-ordinate analysis, Genetic diversity
Online: 8 August 2023 (11:23:00 CEST)
ARTICLE
|
doi:10.20944/preprints202306.0010.v1
Subject:
Computer Science And Mathematics,
Mathematical And Computational Biology
Keywords:
SARS-CoV-2; dashboard; genomic variants; software; pipeline; virus genome assemblies; knowledge base
Online: 1 June 2023 (03:16:09 CEST)
REVIEW
|
doi:10.20944/preprints202212.0582.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
COVID-19; copy number variation (CNV); virome; microbiome; endoretroviral genome (ERV); geographic disparity
Online: 30 December 2022 (10:00:27 CET)
ARTICLE
|
doi:10.20944/preprints202212.0232.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
coronavirus; genome; recombination; COVID-19; reservoir host; secondary host; phylogenetic support; tree reconstruction
Online: 13 December 2022 (07:44:48 CET)
REVIEW
|
doi:10.20944/preprints202211.0169.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
viroid; resistance; tolerance; RNA silencing; plant hormone; spray-induced gene silencing; genome editing
Online: 9 November 2022 (03:10:00 CET)
HYPOTHESIS
|
doi:10.20944/preprints202206.0409.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Non random mutation; interaction-based evolution; hemoglobin S; directed mutation; parallelism; genome organization
Online: 29 June 2022 (14:56:32 CEST)
ARTICLE
|
doi:10.20944/preprints202109.0051.v1
Subject:
Biology And Life Sciences,
Insect Science
Keywords:
Helicoverpa zea; Bollworm; CRISPR; Cry1A; Bt Toxin; Genome Editing; Knockout; Functional Genomics; Resistance
Online: 3 September 2021 (08:19:44 CEST)
REVIEW
|
doi:10.20944/preprints202104.0244.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Staphylococcus aureus; MRSA; genome-scale metabolic models; model-driven discovery; strain-specific models
Online: 8 April 2021 (14:25:31 CEST)
REVIEW
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Ribosomal DNA; ribosomal RNA; mammalian genome; intra- and inter-individual variations; development; diseases.
Online: 26 February 2021 (11:35:55 CET)
REVIEW
|
doi:10.20944/preprints202003.0351.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
Conventional method; Clustered Regularly Interspaced Short Palindromic Sequence; Genome editing; RNA Interference; TALEN
Online: 23 March 2020 (10:23:45 CET)
ARTICLE
|
doi:10.20944/preprints201904.0085.v2
Subject:
Biology And Life Sciences,
Cell And Developmental Biology
Keywords:
cancer near-triploidy; male tumours; karyotype meta-analysis; XXY; whole genome rearrangements; digyny
Online: 14 July 2019 (09:25:18 CEST)
ARTICLE
|
doi:10.20944/preprints201902.0035.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
Botryosphaeria dothidea botybirnavirus 1; Hypovirulence; Botybirnavirus; Genome; Botryosphaeria dothidea; double-stranded RNA virus
Online: 4 February 2019 (13:44:22 CET)
REVIEW
|
doi:10.20944/preprints201812.0156.v1
Subject:
Biology And Life Sciences,
Ecology, Evolution, Behavior And Systematics
Keywords:
Marine microorganisms, marine fungi, algae, marine plants, marine invertebrates, marine vertebrates, genome, metagenome
Online: 12 December 2018 (15:44:09 CET)
REVIEW
|
doi:10.20944/preprints201808.0089.v1
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
firmness; Vaccinium; ripening; cell wall; crispy; quantitative genetics; breeding; molecular markers; genome editing
Online: 5 August 2018 (10:11:33 CEST)
ARTICLE
|
doi:10.20944/preprints202403.1713.v1
Subject:
Engineering,
Electrical And Electronic Engineering
Keywords:
Temperature Sensing; Negative Temperature Coefficient (NTC); Printed Electronics; Printed Temperature Sensors; Thermistors; Silicon Carbide; Wide Band-gap Semiconductor; Screen Printing; Silver ink
Online: 28 March 2024 (15:35:55 CET)
COMMUNICATION
|
doi:10.20944/preprints202311.0250.v1
Subject:
Computer Science And Mathematics,
Artificial Intelligence And Machine Learning
Keywords:
Artificial neural network; deep network; wide network; intra-layer links; Hopfield network; diffusion model; representation engineering; emergent properties; AI agents; netware engineering
Online: 3 November 2023 (11:44:39 CET)
ARTICLE
|
doi:10.20944/preprints202409.0370.v1
Subject:
Public Health And Healthcare,
Public, Environmental And Occupational Health
Keywords:
keyword 1; Covid-19 2; PCR 3; Whole genome sequencing 4; Wastewater-based epidemiology
Online: 4 September 2024 (14:49:55 CEST)
ARTICLE
|
doi:10.20944/preprints202406.1622.v2
Subject:
Computer Science And Mathematics,
Information Systems
Keywords:
Distributed Software Application; Digital Genome; Self-Regulation; Autopoiesis; Associative Memory; Event-Driven Interaction History
Online: 9 August 2024 (12:12:48 CEST)
ARTICLE
|
doi:10.20944/preprints202405.0054.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
neurodegeneration; lysosomal storage; mitochondrial subunit c protein; lipofusciin; fluorescence; whole genome sequencing; electron microscopy
Online: 1 May 2024 (08:15:01 CEST)
ARTICLE
|
doi:10.20944/preprints202404.1298.v1
Subject:
Computer Science And Mathematics,
Artificial Intelligence And Machine Learning
Keywords:
Machine Intelligence; Associative Memory; Event-Driven Transaction History; Self-Regulation; Digital Genome; Autopoiesis; Cognition
Online: 19 April 2024 (14:57:53 CEST)
ARTICLE
|
doi:10.20944/preprints202404.1209.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Mycobacterium tuberculosis; Drug Resistance; Whole Genome Sequencing; Genetic Diversity; Brazil; Novel Mutations
Online: 18 April 2024 (07:51:01 CEST)
ARTICLE
|
doi:10.20944/preprints202312.0929.v1
Subject:
Biology And Life Sciences,
Ecology, Evolution, Behavior And Systematics
Keywords:
Colletotrichum lini; anthracnose; flax pathogen; virulence; Nanopore sequencing; de novo genome assembly
Online: 13 December 2023 (05:07:10 CET)
ARTICLE
|
doi:10.20944/preprints202312.0628.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
IFITM; Influenza A virus; Human cells; WI-38; Genome editing; CRISPR/Cas9; RNA-seq
Online: 8 December 2023 (12:42:54 CET)
ARTICLE
|
doi:10.20944/preprints202310.1454.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Klebsiella pneumoniae, whole genome sequences (WGS), antimicrobial resistance (AMR), multidrug resistance (MDR), colistin resistance
Online: 23 October 2023 (13:26:48 CEST)
ARTICLE
|
doi:10.20944/preprints202309.0727.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
Salmonella virus; viral genome-packaging motor; small terminase; large terminase; Bacteriophage P22; electron microscopy
Online: 12 September 2023 (04:43:44 CEST)
ARTICLE
|
doi:10.20944/preprints202306.2105.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
Methicillin-resistant Staphylococcus aureus; healthcare workers; whole genome sequencing; low-or middle-income countries
Online: 29 June 2023 (12:46:22 CEST)
ARTICLE
|
doi:10.20944/preprints202303.0270.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
genome sequence; infectious bursal disease virus; Nigeria; phylogenetic analysis; poultry; segments A and B
Online: 15 March 2023 (07:49:33 CET)
REVIEW
|
doi:10.20944/preprints202211.0430.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
SARS-CoV-2, evolution, immune evasion, codon usage, attenuation, genome degradation, degeneration, COVID-19
Online: 23 November 2022 (03:29:58 CET)
ARTICLE
|
doi:10.20944/preprints202211.0059.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
COVID-19; SARS-CoV-2; Whole Genome Sequencing; Genomic epidemiology; West Africa, Burkina Faso
Online: 2 November 2022 (11:14:27 CET)
REVIEW
|
doi:10.20944/preprints202210.0313.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
diagnosis; distribution; emaraviruses; forest trees; Fimoviridae; genome organization; phylogenetic relations; protein domains; symptomatology; transmission
Online: 20 October 2022 (14:09:37 CEST)
REVIEW
|
doi:10.20944/preprints202103.0717.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
virulence; antifungal resistance; non-canonical RNAi; epimutant; R3B2; RdRP; transposon; genome stability; Mucorales; mucormycosis.
Online: 30 March 2021 (09:37:39 CEST)
REVIEW
|
doi:10.20944/preprints202009.0548.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
genome-scale metabolic model; microbial community; optimization; design; engineering; computational methods; synthetic microbial consortia
Online: 23 September 2020 (09:52:17 CEST)
ARTICLE
|
doi:10.20944/preprints201905.0002.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
codon position; complete chloroplast; early-diverging angiosperms; monophyly; Nymphaeaceae; Nymphaeales; plastid genome; phylogenomics; repeatability
Online: 3 May 2019 (14:03:46 CEST)
ARTICLE
|
doi:10.20944/preprints201810.0505.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Mucilaginibacer rubeus;Mucilaginibacter kameinonensis; genomic island; evolution; heavy metal resistance; draft genome sequence; CTnDOT
Online: 22 October 2018 (15:21:18 CEST)
REVIEW
|
doi:10.20944/preprints201709.0163.v1
Subject:
Medicine And Pharmacology,
Pulmonary And Respiratory Medicine
Keywords:
next-generation sequencing; whole-genome sequencing; hospital-acquired pneumonia; antibiotic resistance; prediction; clinical metagenomics
Online: 30 September 2017 (04:49:23 CEST)
ARTICLE
|
doi:10.20944/preprints201607.0096.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
number of paralogs; comparative genomics; combinatorial optimization; Mycoplasmas; Halophiles; Orientia; Mycobacterium leprae; genome size
Online: 29 July 2016 (16:24:29 CEST)
ARTICLE
|
doi:10.20944/preprints202404.0210.v1
Subject:
Physical Sciences,
Particle And Field Physics
Keywords:
Gravitation; wide binaries; Modified Newonian Dynamics; dark matter; supraquantum nonlocal correlations; Bell's inequalities; CHSH inequality; fifth force; unification; quantum nonlocality; Popescu-Rohrlich bound
Online: 4 April 2024 (02:30:43 CEST)
ARTICLE
|
doi:10.20944/preprints202311.0603.v1
Subject:
Engineering,
Electrical And Electronic Engineering
Keywords:
beacon collision; beacon interval; Carrier-to-Interference ratio; frequency hopping; gateway; GFSK; Internet of Things (IoT); IEEE 802.15.4; latency; Wide Area Network (WAN); sensors
Online: 9 November 2023 (07:33:06 CET)
ARTICLE
|
doi:10.20944/preprints202407.2212.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
Bagaza virus; emerging genotypes; phylogenetic analysis; molecular characterization; complete genome; Alectoris rufa; Spain
Online: 29 July 2024 (07:12:47 CEST)
REVIEW
|
doi:10.20944/preprints202403.1124.v1
Subject:
Medicine And Pharmacology,
Psychiatry And Mental Health
Keywords:
common fragile sites; stress; mobile elements; immune; RAG 1/2; genome plasticity; neuropsychiatric; GWAS; epigenetic
Online: 22 March 2024 (07:46:57 CET)
ARTICLE
|
doi:10.20944/preprints202403.0136.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Metabolic Network Analysis; Genome-Scale Metabolic Models; Exo-Metabolomics Integration; Sampling Algorithms; Endothelial Cell Metabolism
Online: 4 March 2024 (14:02:11 CET)
ARTICLE
|
doi:10.20944/preprints202312.0623.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
crAss-like phages; genome sequence; diversity-generating retroelements; temperate phages; phylogenetics; virus taxonomy; 3D modeling
Online: 8 December 2023 (13:28:31 CET)
ARTICLE
|
doi:10.20944/preprints202309.0748.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
SARS-CoV-2; coronavirus; monoclonal antibodies; resistance; nanopore; Sweden; whole-genome sequencing; receptor binding domain
Online: 12 September 2023 (11:14:08 CEST)
ARTICLE
|
doi:10.20944/preprints202305.0094.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
economic sustainability; environmental sustainability; social sustainability; genome scale metabolic model; metabolic engineering; growth coupled production
Online: 3 May 2023 (04:32:50 CEST)
ARTICLE
|
doi:10.20944/preprints202304.0961.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
COVID-19 patient; whole Genome sequence; Of SARS-COV-2; phylogenetic analysis and Transmission supported
Online: 26 April 2023 (05:15:36 CEST)
REVIEW
|
doi:10.20944/preprints202208.0154.v1
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
Genome selection; Rice breeding; Genetic analysis; Omics assisted markers; Nutritional quality; Genomics and pangenomics; Biofortification
Online: 8 August 2022 (10:53:16 CEST)
ARTICLE
|
doi:10.20944/preprints202204.0255.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
genome assembly; Apocynaceae; SSR; superbarcoding; flow cytometry; monoterpene indole alkaloids; DNA barcoding; cpDNA; Mandevilla sanderi
Online: 27 April 2022 (10:07:43 CEST)
REVIEW
|
doi:10.20944/preprints202202.0224.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
COVID-19; pandemic; SARS-CoV-2; Omicron variant; emerging disease; global health; virus; genome; mutation
Online: 18 February 2022 (05:23:18 CET)
ARTICLE
|
doi:10.20944/preprints202110.0246.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
Chloroplast genome; Machilus leptophylla; Hanceola exserta; Rubus bambusarum; Rubus henryi; Simple sequence repeat; Phylogenetic analysis
Online: 18 October 2021 (14:30:50 CEST)
ARTICLE
|
doi:10.20944/preprints202011.0685.v1
Subject:
Biology And Life Sciences,
Anatomy And Physiology
Keywords:
teleost fish; Notothenioidei; genome modifications; IgT; exonic remnant; immunoglobulin domain; Antarctic marine environment; molecular evolution
Online: 27 November 2020 (11:31:09 CET)
REVIEW
|
doi:10.20944/preprints202011.0667.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Plant breeding; Genome editing; Molecular breeding; Prime editing; Base editing; CRISPR Cas; Epigenetics; Speed breeding
Online: 26 November 2020 (11:17:56 CET)
REVIEW
|
doi:10.20944/preprints202008.0007.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
spatial genome architecture; 3D chromatin organization; DNA loops; noncoding mutations; enhancer; blood cancer; hematopoietic malignancies
Online: 2 August 2020 (09:33:40 CEST)
COMMUNICATION
|
doi:10.20944/preprints202004.0253.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
Genomic Epidemiology; GenomeTrakr; microbial pathogen surveillance, NCBI submission; whole genome sequencing; QA/QC; One Health
Online: 16 April 2020 (05:26:42 CEST)
ARTICLE
|
doi:10.20944/preprints202002.0258.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
SARS-CoV-2; cell-entry receptor; ACE2; The Cancer Genome Atlas; susceptibility; demographic factors; polymorphism
Online: 25 February 2020 (06:30:17 CET)
ARTICLE
|
doi:10.20944/preprints201808.0539.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
computational genomics; genome comparison; algorithms; genetic testing; privacy; direct-to-consumer; study design; population genetics
Online: 31 August 2018 (04:59:28 CEST)
REVIEW
|
doi:10.20944/preprints202405.1236.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
Plant Virus; History; transmission; genome; Detection; biological era; biophysical era; molecular genetics era; viral diagnostics era
Online: 20 May 2024 (12:40:05 CEST)
REVIEW
|
doi:10.20944/preprints202402.0255.v2
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
new genomic techniques (NGT); genetically engineered organisms; genome editing; risk assessment; unintended effects in NGT plants
Online: 6 February 2024 (13:40:47 CET)
ARTICLE
|
doi:10.20944/preprints202402.0223.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Genome packaging ATPase; vaccinia virus; coiled coil motif; FtsK/HerA superfamily; Nucleo-cytoplasmic large DNA viruses
Online: 5 February 2024 (07:48:18 CET)
ARTICLE
|
doi:10.20944/preprints202309.1020.v1
Subject:
Biology And Life Sciences,
Life Sciences
Keywords:
Listeria monocytogenes; food-born pathogen; invasive listeriosis; cgMLST; whole genome sequencing; prophages; virulence factors; COVID-19.
Online: 14 September 2023 (14:51:01 CEST)
ARTICLE
|
doi:10.20944/preprints202208.0241.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Tyr-FISH; integration genetic; cytogenetic and pseudochromosome maps; transcript based markers; genome assembly; bioinformatics; Allium cepa
Online: 12 August 2022 (12:54:02 CEST)
ARTICLE
|
doi:10.20944/preprints202104.0607.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Tyr-FISH; plant chromosome preparation; recombinant and cytogenetic maps; transcript-based markers; genome assembly; Allium cepa
Online: 22 April 2021 (12:19:32 CEST)
REVIEW
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
synthetic biology; CRISPR; Cas9; biotechnology; biodesign; nickase; base editing; prime editing; genome editing; ethics; responsible innovation
Online: 1 October 2020 (08:38:22 CEST)
REVIEW
|
doi:10.20944/preprints201911.0252.v1
Subject:
Biology And Life Sciences,
Ecology, Evolution, Behavior And Systematics
Keywords:
data; sequence; information; entropy; genome; gene; proteins; time-series; modeling; meta-genomics; transcriptomics; proteomics; bioinformatics; DNA
Online: 22 November 2019 (02:28:15 CET)
ARTICLE
|
doi:10.20944/preprints201808.0187.v1
Subject:
Medicine And Pharmacology,
Veterinary Medicine
Keywords:
Porcine rotavirus H; Porcine rotavirus C; Full genome; Classification; Genotype; Non-structural protein 3; Gene rearrangement
Online: 9 August 2018 (11:38:44 CEST)
BRIEF REPORT
|
doi:10.20944/preprints202407.2052.v1
Subject:
Biology And Life Sciences,
Other
Keywords:
Smith-Magenis syndrome; retinoic acid-induced 1 protein; neurodevelopmental disorders; joint whole genome sequencing analysis
Online: 26 July 2024 (11:45:07 CEST)
ARTICLE
|
doi:10.20944/preprints202406.1092.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
CRISPR/Cas9; genome editing; adenovirus vector; all-in-one, multiplex guide RNA; shortened U6 promoter; gene therapy
Online: 17 June 2024 (08:35:01 CEST)
REVIEW
|
doi:10.20944/preprints202402.0085.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
CRISPR-Cas System, Biomedicine, Genome engineering, Gene editing, Human disease, Cancer, Animal models Concerns, Benefits, Applications, Function
Online: 1 February 2024 (14:24:57 CET)
REVIEW
|
doi:10.20944/preprints202401.0789.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
systems microbiology; microbial ecology; omics data integration; metaproteomics; genome-scale modeling; constraint-based modeling; boolean modeling, bioinformatics
Online: 10 January 2024 (09:57:55 CET)
ARTICLE
|
doi:10.20944/preprints202311.0981.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
Bacteriophage; Genome sequence; Diversity-generating retroelement; C-type lectin; Tentaclin; Adhesin; Ig-like domain; Receptor-binding protein
Online: 15 November 2023 (09:55:37 CET)
ARTICLE
|
doi:10.20944/preprints202311.0047.v1
Subject:
Computer Science And Mathematics,
Artificial Intelligence And Machine Learning
Keywords:
digital genome; general theory of information; structural machines; machine intelligence; knowledge structures; cognizing oracles; super-symbolic computing
Online: 1 November 2023 (10:08:14 CET)
ARTICLE
|
doi:10.20944/preprints202309.0299.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
mobile genetic elements; Anti-microbial resistance; Klebsiella pneumoniae; Whole genome sequencing; integrons; plasmids; sequence types; phylogenetic analysis
Online: 6 September 2023 (04:28:45 CEST)
REVIEW
|
doi:10.20944/preprints202307.1110.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
multiple myeloma; next generation sequencing; whole genome sequencing; whole exome se-quencing; myTYPE panel; minimal residual disease.
Online: 17 July 2023 (15:06:14 CEST)
COMMUNICATION
|
doi:10.20944/preprints202112.0040.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Cannabis sativa L.; Humulus lupulus L.; Humulus japonicus Siebold & Zucc.; sex chromosomes; DNA repeats; transposons; genome sequencing
Online: 3 December 2021 (09:25:39 CET)
ARTICLE
|
doi:10.20944/preprints202111.0176.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
whole genome sequencing; antibiotic resistance; Salmonella Enteritidis; Salmonella Typhimurium; Salmonella Bovismorbificans; colistin resistance; mcr-1; mcr-9
Online: 9 November 2021 (13:46:05 CET)
REVIEW
|
doi:10.20944/preprints202104.0602.v2
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
cancer; DNA sequencing; DNA synthesis; enzyme; free-radicals; genome; HPV; oncogenes; retinoblastoma; ribonucleotide reductase; RnR; SMT; TCGA
Online: 6 July 2021 (11:32:47 CEST)
ARTICLE
|
doi:10.20944/preprints202107.0094.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Phyllanthaceae; Phyllanthus; Leptopus; transition and transversion substitutions; chloroplast genome; phylogenetic; polymorphic loci; rps16 loss; atpF intron loss
Online: 5 July 2021 (12:03:13 CEST)
BRIEF REPORT
|
doi:10.20944/preprints202105.0526.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
SARS-CoV-2 virus; complete genome sequencing; COVID-19 RT-PCR testing; Spike protein; vi-ral variants
Online: 21 May 2021 (15:12:17 CEST)
ARTICLE
|
doi:10.20944/preprints202009.0273.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Chromobacterium vaccinii; biofilm; sharing goods; social cheater; bog microbiome; bacterial genome, violacein, cold adaptation, IDBac, QS mutant
Online: 12 September 2020 (12:04:38 CEST)
REVIEW
|
doi:10.20944/preprints201811.0269.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
chromosome instability (CIN); chromoplexy; genome chaos; chromosomal heterogeneity; karyotype heterogeneity; non-clonal chromosome aberration (NCCA); second cancer
Online: 12 November 2018 (06:38:41 CET)
REVIEW
|
doi:10.20944/preprints202406.1327.v2
Subject:
Biology And Life Sciences,
Horticulture
Keywords:
date palm; genomics; genetic diversity; genome editing; pest resistance; disease resistance; in vitro propagation; AI-ML; precision agriculture
Online: 28 June 2024 (08:01:26 CEST)
ARTICLE
|
doi:10.20944/preprints202312.1981.v1
Subject:
Medicine And Pharmacology,
Pathology And Pathobiology
Keywords:
SINE-VNTR-Alu; transposable elements; whole genome sequencing; RNA-seq; quantitative trait loci; Amyotrophic Lateral Sclerosis; HLA; MAPT
Online: 26 December 2023 (11:27:43 CET)
ARTICLE
|
doi:10.20944/preprints202307.0587.v1
Subject:
Public Health And Healthcare,
Public Health And Health Services
Keywords:
beef production chain; Listeria innocua; whole-genome sequencing; sequence type; an-timicrobial resistance genes; virulence gene; South Africa
Online: 10 July 2023 (09:48:11 CEST)
ARTICLE
|
doi:10.20944/preprints202301.0480.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
avian influenza; highly pathogenic avian influenza; next generation sequencing; whole genome sequencing; nanopore technology; methods comparison; clinical validation
Online: 26 January 2023 (15:19:53 CET)
ARTICLE
|
doi:10.20944/preprints202207.0372.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
RNA genome; RNA structure; Cell compartment-specific folding; LTR-retrotransposon; gRNA dimerization; gRNA cyclization; tRNA annealing; Ty1; Gag.
Online: 25 July 2022 (10:07:00 CEST)
ARTICLE
|
doi:10.20944/preprints202202.0211.v2
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
pIgR; gene structure; cold environment; gene expression; teleost immunity; adaptive evolution; mucosal tissues; genome alteration; Notothenioidei; IgV domains.
Online: 27 June 2022 (08:41:00 CEST)
ARTICLE
|
doi:10.20944/preprints202112.0377.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
pig genome; gamma/delta T-cell; TRG locus; TRG genes; gamma/delta high species; Cetartiodac-tyla; Immunogenomics; evolution
Online: 23 December 2021 (10:02:37 CET)
REVIEW
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
natural products; biosynthetic gene clusters; synthetic biology; genome mining strategies; modification strategies; design-build-test-learn (DBTL) cycle
Online: 8 October 2021 (09:10:02 CEST)
REVIEW
Subject:
Business, Economics And Management,
Economics
Keywords:
new plant engineering techniques (NPETs); new breeding techniques (NBTs); genome editing; gene editing; cisgenic; willingness to pay (WTP)
Online: 1 October 2021 (12:55:10 CEST)
REVIEW
|
doi:10.20944/preprints202001.0155.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Tumor microenvironment; tumor stroma; cancer-associated fibroblasts; heterogeneity; biomarkers; cancer; The Cancer Genome Atlas; gene expression; computational biology
Online: 15 January 2020 (12:56:44 CET)
ARTICLE
|
doi:10.20944/preprints202105.0480.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
camptothecin; drug distribution; drug-membrane interaction; biophysical profiling; biomimetic models; partition coefficient; ADMET/PK prediction; small and wide-angle X-ray diffraction; fluorescence spectroscopy; human serum albumin (HSA)
Online: 20 May 2021 (10:52:33 CEST)
REVIEW
|
doi:10.20944/preprints202405.0555.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
origin of evolution; surface metabolism; progenote state; collective optimization; genome nucleation; coevolution; Darwinian threshold; Darwinian speciation; tree of life
Online: 9 May 2024 (07:34:37 CEST)
ARTICLE
|
doi:10.20944/preprints202403.1868.v1
Subject:
Public Health And Healthcare,
Other
Keywords:
beef production chain; Listeria monocytogenes, whole-genome sequencing; sequence type; clonal complexes; virulence factor; antimicrobial genes; plasmids; South Africa
Online: 29 March 2024 (15:54:53 CET)
ARTICLE
|
doi:10.20944/preprints202401.0987.v1
Subject:
Biology And Life Sciences,
Parasitology
Keywords:
Genome assembly; Plasmodium falciparum; Long-read sequencing; Nanopore; PromethION; Pf3D7; PfW2
Online: 12 January 2024 (07:01:51 CET)