ARTICLE
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
human metapneumovirus; whole genome sequencing; genomic epidemiology
Online: 3 February 2021 (10:08:44 CET)
ARTICLE
|
doi:10.20944/preprints201910.0271.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
genome assembly; monoxenous trypanosomatids; insect trypanosomatids; trypanosomatidae; whole genome
Online: 24 October 2019 (05:20:52 CEST)
REVIEW
|
doi:10.20944/preprints202307.1110.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
multiple myeloma; next generation sequencing; whole genome sequencing; whole exome se-quencing; myTYPE panel; minimal residual disease.
Online: 17 July 2023 (15:06:14 CEST)
ARTICLE
|
doi:10.20944/preprints202406.1122.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
Mycobacterium tuberculosis; Whole Genome Sequencing; Automation; Antimicrobial Resistance; Decentralized Diagnostics
Online: 17 June 2024 (08:34:42 CEST)
ARTICLE
|
doi:10.20944/preprints201912.0354.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Lactobacillus helveticus; probiotics; whole genome sequencing; PacBio; probiotic genes; bacteriocins; gene expression
Online: 26 December 2019 (10:56:44 CET)
ARTICLE
|
doi:10.20944/preprints202407.0217.v1
Subject:
Public Health And Healthcare,
Public, Environmental And Occupational Health
Keywords:
whole genome sequencing; metagenomics; antibiotic residue testing; retail pork meat; South Africa
Online: 2 July 2024 (14:50:33 CEST)
ARTICLE
|
doi:10.20944/preprints202407.1518.v1
Subject:
Biology And Life Sciences,
Insect Science
Keywords:
Lecanicillium lecanii; whole genome sequencing; entomopathogenic fungus; Bactrocera dorsalis
Online: 19 July 2024 (02:30:15 CEST)
ARTICLE
|
doi:10.20944/preprints201910.0154.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
papillary thyroid cancer; germline mutations; whole genome sequencing; predisposition markers; pathway analysis
Online: 13 October 2019 (17:07:34 CEST)
ARTICLE
|
doi:10.20944/preprints202409.0370.v1
Subject:
Public, Environmental And Occupational Health,
Public Health And Healthcare
Keywords:
keyword 1; Covid-19 2; PCR 3; Whole genome sequencing 4; Wastewater-based epidemiology
Online: 4 September 2024 (14:49:55 CEST)
ARTICLE
|
doi:10.20944/preprints202404.1209.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Mycobacterium tuberculosis; Drug Resistance; Whole Genome Sequencing; Genetic Diversity; Brazil; Novel Mutations
Online: 18 April 2024 (07:51:01 CEST)
ARTICLE
|
doi:10.20944/preprints202407.1137.v1
Subject:
Biology And Life Sciences,
Life Sciences
Keywords:
Staphylococcus aureus; bloodstream infections; whole-genome sequencing; antibiotic resistance; virulence
Online: 15 July 2024 (10:37:36 CEST)
ARTICLE
|
doi:10.20944/preprints202306.2105.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
Methicillin-resistant Staphylococcus aureus; healthcare workers; whole genome sequencing; low-or middle-income countries
Online: 29 June 2023 (12:46:22 CEST)
ARTICLE
|
doi:10.20944/preprints202301.0480.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
avian influenza; highly pathogenic avian influenza; next generation sequencing; whole genome sequencing; nanopore technology; methods comparison; clinical validation
Online: 26 January 2023 (15:19:53 CET)
ARTICLE
|
doi:10.20944/preprints202309.0748.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
SARS-CoV-2; coronavirus; monoclonal antibodies; resistance; nanopore; Sweden; whole-genome sequencing; receptor binding domain
Online: 12 September 2023 (11:14:08 CEST)
ARTICLE
|
doi:10.20944/preprints202310.1454.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Klebsiella pneumoniae, whole genome sequences (WGS), antimicrobial resistance (AMR), multidrug resistance (MDR), colistin resistance
Online: 23 October 2023 (13:26:48 CEST)
ARTICLE
|
doi:10.20944/preprints202405.0998.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
Escherichia coli; pigs; close human contacts; One Health; antibiotic resistance; whole genome sequencing; virulence factors; core genome MLST and hierarchical clustering; sequence type complex 10; South Africa
Online: 15 May 2024 (04:32:27 CEST)
REVIEW
|
doi:10.20944/preprints202408.1719.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
Genome; DNA sequencing; Next Generation Sequencing
Online: 26 August 2024 (02:24:32 CEST)
ARTICLE
|
doi:10.20944/preprints202310.2063.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
CRISPR/Cas9; genome engineering; whole-genome sequencing; PAM identification
Online: 31 October 2023 (10:59:19 CET)
ARTICLE
|
doi:10.20944/preprints202303.0175.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Whole genome sequence; Plesiomonas genus; Plesiomoniasis; Aquaculture
Online: 9 March 2023 (09:56:40 CET)
ARTICLE
|
doi:10.20944/preprints202408.1864.v1
Subject:
Biology And Life Sciences,
Life Sciences
Keywords:
domestic dogs; whole mitochondrial DNA; feces; fecal samples; next-generation sequencer
Online: 27 August 2024 (11:00:32 CEST)
ARTICLE
|
doi:10.20944/preprints202406.0760.v1
Subject:
Biology And Life Sciences,
Life Sciences
Keywords:
newborn screening; neonates; WES; WGS; genome screening; genome sequencing
Online: 12 June 2024 (11:09:36 CEST)
ARTICLE
|
doi:10.20944/preprints202401.0850.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Klebsiella pneumoniae; virulence; genome; whole genome sequences (WGS); colistin resistance
Online: 10 January 2024 (16:17:52 CET)
ARTICLE
|
doi:10.20944/preprints202307.0808.v1
Subject:
Medicine And Pharmacology,
Veterinary Medicine
Keywords:
Canine lymphoma; Whole-exome sequencing; B-cell; PARR
Online: 12 July 2023 (09:38:44 CEST)
ARTICLE
|
doi:10.20944/preprints202404.0566.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
Barcoding; whole genome sequencing; polyketides; antimicrobial resistance; denitrification
Online: 8 April 2024 (15:06:32 CEST)
ARTICLE
|
doi:10.20944/preprints202308.0015.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
Human metapneumovirus; non-pharmaceutical interventions; whole-genome sequencing
Online: 1 August 2023 (05:24:24 CEST)
ARTICLE
|
doi:10.20944/preprints202207.0292.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Cryptococcus; Whole-Genome Sequencing; VGVI; phylogenomics; Molecular Type
Online: 20 July 2022 (03:16:00 CEST)
ARTICLE
|
doi:10.20944/preprints202401.1646.v1
Subject:
Medicine And Pharmacology,
Medicine And Pharmacology
Keywords:
whole exome sequencing; T cell receptor repertoire; diversity; rheumatoid arthritis
Online: 23 January 2024 (06:46:19 CET)
ARTICLE
|
doi:10.20944/preprints202208.0057.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
infectious bronchitis; viral evolution; whole genome sequencing; DMV; QX.
Online: 2 August 2022 (09:27:23 CEST)
ARTICLE
|
doi:10.20944/preprints202112.0354.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
whole genome sequencing; cancer predisposition; mucin; reactive oxygen species
Online: 22 December 2021 (11:44:20 CET)
ARTICLE
|
doi:10.20944/preprints202103.0121.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Familial colorectal cancer; SRC; germline variant; whole genome sequencing
Online: 3 March 2021 (09:52:06 CET)
ARTICLE
|
doi:10.20944/preprints202103.0257.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
SLC15A4; germline variant; familial colorectal cancer; whole exome sequencing
Online: 9 March 2021 (10:24:33 CET)
ARTICLE
|
doi:10.20944/preprints202401.1643.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
human immunodeficiency virus; Vela Sentosa; Miseq; personal genome machine
Online: 23 January 2024 (09:15:58 CET)
ARTICLE
|
doi:10.20944/preprints202305.0648.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
carbapenem-resistant Klebsiella pneumoniae; whole genome sequencing; core genome single-nucleotide polymorphism analysis; molecular epidemiology
Online: 9 May 2023 (11:57:43 CEST)
ARTICLE
|
doi:10.20944/preprints202409.0031.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Aspergillus hortae; Genome; Pathogenic fungi; antifungals susceptibility
Online: 2 September 2024 (12:27:06 CEST)
ARTICLE
|
doi:10.20944/preprints202403.0381.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
colistin resistance; mechanisms; mgrB; population analysis profiling; whole genome sequencing
Online: 7 March 2024 (09:39:40 CET)
REVIEW
|
doi:10.20944/preprints202402.1197.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
Graphs; Anchors; Suffix Trees; High-Throughput Sequencing; Whole genome Alignment
Online: 22 February 2024 (04:28:36 CET)
ARTICLE
|
doi:10.20944/preprints202311.1565.v1
Subject:
Biology And Life Sciences,
Horticulture
Keywords:
goji berry; breeding; plant resistance; Whole Genome Sequencing; BODYGUARD genes.
Online: 26 November 2023 (05:17:31 CET)
ARTICLE
|
doi:10.20944/preprints202310.1276.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
COVID-19; SARS-CoV-2; whole-genome sequencing; variants; lineages
Online: 19 October 2023 (11:25:35 CEST)
BRIEF REPORT
|
doi:10.20944/preprints202308.1537.v1
Subject:
Medicine And Pharmacology,
Pediatrics, Perinatology And Child Health
Keywords:
congenital anomalies; newborns; whole genome sequencing analysis; protocol; phenotype; registry
Online: 22 August 2023 (07:59:13 CEST)
ARTICLE
|
doi:10.20944/preprints202306.1758.v1
Subject:
Public Health And Healthcare,
Public Health And Health Services
Keywords:
canine rabies virus; whole genome sequencing; nanopore technology; biosurveillance; Philippines
Online: 26 June 2023 (07:18:18 CEST)
ARTICLE
|
doi:10.20944/preprints202301.0350.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
whole genome sequencing; β-lactamases; MLST; plasmid replicons; Klebsiella pneumoniae
Online: 19 January 2023 (09:06:46 CET)
ARTICLE
|
doi:10.20944/preprints202102.0604.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
West Nile Virus; outbreak; meningoencephalitis; epidemiology; phylogeny; whole genome sequencing
Online: 26 February 2021 (09:46:38 CET)
ARTICLE
|
doi:10.20944/preprints202012.0421.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
Whole genome pooled-seq; Pakistani Teddy goat; Genomic selection signatures
Online: 17 December 2020 (09:13:29 CET)
ARTICLE
|
doi:10.20944/preprints202006.0089.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Wuhua yellow chicken; whole genome resequencing; heritable variation; selection signal
Online: 7 June 2020 (14:42:23 CEST)
ARTICLE
|
doi:10.20944/preprints201809.0378.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
enterobacteriaceae; antibiotics; beta-lactamases; beta-lactam resistome; whole genome sequencing
Online: 19 September 2018 (09:47:42 CEST)
REVIEW
|
doi:10.20944/preprints202403.1050.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
whole genomic sequencing; proteomics; transcriptomics; machine learning; deep learning; modalities
Online: 19 March 2024 (02:25:51 CET)
ARTICLE
|
doi:10.20944/preprints202102.0040.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
APCDD1; HDAC5; germline variants; familial colorectal cancer; whole exome sequencing; promoter activity
Online: 1 February 2021 (14:04:24 CET)
ARTICLE
|
doi:10.20944/preprints202308.1208.v1
Subject:
Biology And Life Sciences,
Ecology, Evolution, Behavior And Systematics
Keywords:
Mitochondrial genome; Calanoida; Arthropod phylogeny; Molecular taxonomy; Chennai coast
Online: 16 August 2023 (11:18:22 CEST)
ARTICLE
|
doi:10.20944/preprints202309.0457.v1
Subject:
Medicine And Pharmacology,
Endocrinology And Metabolism
Keywords:
thyroid cancer; whole-genome sequencing; non-medullary thyroid cancer; germline; genetics
Online: 7 September 2023 (03:46:26 CEST)
REVIEW
|
doi:10.20944/preprints202409.0155.v1
Subject:
Life Sciences,
Biology And Life Sciences
Keywords:
DNA methylation; pancreatic ductal adenocarcinoma; pancreatic cancer; whole-genome bisulfite sequencing; metastasis
Online: 3 September 2024 (09:38:37 CEST)
ARTICLE
|
doi:10.20944/preprints202404.0184.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
probiotics; nutrient digestion; antibiotic resistance; antibacterial activity; whole genome sequence
Online: 2 April 2024 (10:16:40 CEST)
ARTICLE
|
doi:10.20944/preprints202310.0558.v1
Subject:
Biology And Life Sciences,
Horticulture
Keywords:
Ornamental kale, F1DH population, Whole-genome resequencing, High-density genetic linkage map
Online: 11 October 2023 (07:55:29 CEST)
ARTICLE
|
doi:10.20944/preprints202307.0601.v1
Subject:
Medicine And Pharmacology,
Clinical Medicine
Keywords:
COVID-19; pneumonia; ribavirin aerosol; treatment; outcome; viral load; whole genome sequencing
Online: 10 July 2023 (10:16:20 CEST)
ARTICLE
|
doi:10.20944/preprints202306.0404.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
Chicken infectious anemia virus; isolation and identification; pathogenicity; whole genome; bioinformatics analysis
Online: 6 June 2023 (08:05:07 CEST)
ARTICLE
|
doi:10.20944/preprints202211.0228.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Neisseria gonorrhoeae; Neisseria meningitidis; whole genome sequencing; chromosomal rearrange-ments; mobile elements
Online: 14 November 2022 (02:11:22 CET)
ARTICLE
|
doi:10.20944/preprints202108.0312.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Komagataeibacter rhaeticus; Bacterial cellulose; Crude glycerol; Minimal medium; Whole-genome analysis; Acetate
Online: 16 August 2021 (08:32:19 CEST)
ARTICLE
|
doi:10.20944/preprints202107.0020.v1
Subject:
Biology And Life Sciences,
Anatomy And Physiology
Keywords:
IBV; infectious bronchitis; variants; whole-genome sequencing, enteric tropism; runting-stunting syndrome
Online: 1 July 2021 (11:25:48 CEST)
ARTICLE
|
doi:10.20944/preprints202009.0559.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
porcine astroviruses; linear antigenic epitopes; recombination; glycosylation; whole genome sequences; East Africa
Online: 24 September 2020 (03:26:44 CEST)
ARTICLE
|
doi:10.20944/preprints202007.0144.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
phylodynamic analyses; SARS-CoV2 circulation in Italy; molecular tracing; Whole Genome Sequencing
Online: 8 July 2020 (11:00:19 CEST)
ARTICLE
|
doi:10.20944/preprints201911.0353.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
inactivated vaccine; vaccine matching; composition; deep sequencing; degraded RNA; FMDV; whole genome
Online: 28 November 2019 (04:03:46 CET)
ARTICLE
|
doi:10.20944/preprints201705.0206.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Clostridium difficile; ST201; binary toxin-positive; whole genome sequencing; comparative genomic analysis
Online: 30 May 2017 (06:15:11 CEST)
ARTICLE
|
doi:10.20944/preprints202008.0718.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
early-onset breast cancer; hereditary cancer; whole-exome sequencing; young women
Online: 31 August 2020 (09:46:26 CEST)
ARTICLE
|
doi:10.20944/preprints202012.0473.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
transposable elements; mobile element insertion events; next generation sequencing (NGS); genome evolution
Online: 18 December 2020 (14:53:44 CET)
ARTICLE
|
doi:10.20944/preprints202406.1937.v1
Subject:
Public Health And Healthcare,
Other
Keywords:
SARS-CoV-2; genomic epidemiology; genomic surveillance; recombination; whole-genome sequencing; California COVIDNet
Online: 27 June 2024 (11:03:23 CEST)
ARTICLE
|
doi:10.20944/preprints202406.1394.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
SARS-CoV-2; Genetic diversity; Whole genome sequencing; Phylogenetic tree; COVID-19; Transmission
Online: 21 June 2024 (05:04:45 CEST)
ARTICLE
|
doi:10.20944/preprints202309.1057.v1
Subject:
Medicine And Pharmacology,
Medicine And Pharmacology
Keywords:
vancomycin-resistant enterococcus faecium; hospital epidemic; whole genome analysis; infection prevention and control
Online: 15 September 2023 (11:41:52 CEST)
ARTICLE
|
doi:10.20944/preprints202308.0658.v1
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
Mungbean, Vigna, Whole genome sequence, SSR markers, Principal co-ordinate analysis, Genetic diversity
Online: 8 August 2023 (11:23:00 CEST)
ARTICLE
|
doi:10.20944/preprints201904.0085.v2
Subject:
Biology And Life Sciences,
Cell And Developmental Biology
Keywords:
cancer near-triploidy; male tumours; karyotype meta-analysis; XXY; whole genome rearrangements; digyny
Online: 14 July 2019 (09:25:18 CEST)
ARTICLE
|
doi:10.20944/preprints202403.0851.v1
Subject:
Medicine And Pharmacology,
Neuroscience And Neurology
Keywords:
dementia; whole exome sequencing; rare pathogenic variants; ciliary defects; argininosuccinate synthase deficiency
Online: 14 March 2024 (15:18:08 CET)
ARTICLE
|
doi:10.20944/preprints202405.0054.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
neurodegeneration; lysosomal storage; mitochondrial subunit c protein; lipofusciin; fluorescence; whole genome sequencing; electron microscopy
Online: 1 May 2024 (08:15:01 CEST)
ARTICLE
|
doi:10.20944/preprints202211.0059.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
COVID-19; SARS-CoV-2; Whole Genome Sequencing; Genomic epidemiology; West Africa, Burkina Faso
Online: 2 November 2022 (11:14:27 CET)
REVIEW
|
doi:10.20944/preprints201709.0163.v1
Subject:
Medicine And Pharmacology,
Pulmonary And Respiratory Medicine
Keywords:
next-generation sequencing; whole-genome sequencing; hospital-acquired pneumonia; antibiotic resistance; prediction; clinical metagenomics
Online: 30 September 2017 (04:49:23 CEST)
CASE REPORT
|
doi:10.20944/preprints202408.0010.v1
Subject:
Medicine And Pharmacology,
Obstetrics And Gynaecology
Keywords:
breast pathology; breast abscess; suppurative breast lesion; tuberculous mastitis; breast cancer; mastitis; idiopathic granulomatous mastitis; somatic mutations; pathogenic mutations; whole-exome sequencing
Online: 1 August 2024 (10:59:25 CEST)
ARTICLE
|
doi:10.20944/preprints202311.1812.v1
Subject:
Medicine And Pharmacology,
Immunology And Allergy
Keywords:
autoimmune adrenal insufficiency; autoimmune polyglandular syndromes; autoantibodies; microarray; whole-exome sequencing; Trio-exome sequencing; high-resolution HLA typing
Online: 29 November 2023 (02:22:25 CET)
ARTICLE
|
doi:10.20944/preprints202304.0961.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
COVID-19 patient; whole Genome sequence; Of SARS-COV-2; phylogenetic analysis and Transmission supported
Online: 26 April 2023 (05:15:36 CEST)
COMMUNICATION
|
doi:10.20944/preprints202004.0253.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
Genomic Epidemiology; GenomeTrakr; microbial pathogen surveillance, NCBI submission; whole genome sequencing; QA/QC; One Health
Online: 16 April 2020 (05:26:42 CEST)
ARTICLE
|
doi:10.20944/preprints202107.0275.v1
Subject:
Biology And Life Sciences,
Anatomy And Physiology
Keywords:
Genome sequencing; de novo Assembly; Scaffolding; Chromosome-scale; Nanopore sequencing; Long reads; Optical maps; Bionano Genomics; Hi-C; Omni-C; Pore-C; Plant genomes
Online: 12 July 2021 (22:55:37 CEST)
ARTICLE
|
doi:10.20944/preprints202309.1020.v1
Subject:
Biology And Life Sciences,
Life Sciences
Keywords:
Listeria monocytogenes; food-born pathogen; invasive listeriosis; cgMLST; whole genome sequencing; prophages; virulence factors; COVID-19.
Online: 14 September 2023 (14:51:01 CEST)
BRIEF REPORT
|
doi:10.20944/preprints202407.2052.v1
Subject:
Biology And Life Sciences,
Other
Keywords:
Smith-Magenis syndrome; retinoic acid-induced 1 protein; neurodevelopmental disorders; joint whole genome sequencing analysis
Online: 26 July 2024 (11:45:07 CEST)
ARTICLE
|
doi:10.20944/preprints202309.0299.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
mobile genetic elements; Anti-microbial resistance; Klebsiella pneumoniae; Whole genome sequencing; integrons; plasmids; sequence types; phylogenetic analysis
Online: 6 September 2023 (04:28:45 CEST)
ARTICLE
|
doi:10.20944/preprints202111.0176.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
whole genome sequencing; antibiotic resistance; Salmonella Enteritidis; Salmonella Typhimurium; Salmonella Bovismorbificans; colistin resistance; mcr-1; mcr-9
Online: 9 November 2021 (13:46:05 CET)
ARTICLE
|
doi:10.20944/preprints202308.1167.v1
Subject:
Public Health And Healthcare,
Public Health And Health Services
Keywords:
COVID-19; SARS-COV-2; Omicron Variants; Phylogenetic tree; Genome Sequence
Online: 16 August 2023 (07:47:50 CEST)
REVIEW
|
doi:10.20944/preprints202401.0237.v1
Subject:
Medicine And Pharmacology,
Cardiac And Cardiovascular Systems
Keywords:
congenital heart disease; first heart field; second heart field; whole exome sequencing; whole genome sequencing; loss-of-function variant; copy number variants; gene variants; deletion; de novo mutations
Online: 3 January 2024 (11:57:54 CET)
ARTICLE
|
doi:10.20944/preprints202312.1981.v1
Subject:
Medicine And Pharmacology,
Pathology And Pathobiology
Keywords:
SINE-VNTR-Alu; transposable elements; whole genome sequencing; RNA-seq; quantitative trait loci; Amyotrophic Lateral Sclerosis; HLA; MAPT
Online: 26 December 2023 (11:27:43 CET)
ARTICLE
|
doi:10.20944/preprints202307.0587.v1
Subject:
Public Health And Healthcare,
Public Health And Health Services
Keywords:
beef production chain; Listeria innocua; whole-genome sequencing; sequence type; an-timicrobial resistance genes; virulence gene; South Africa
Online: 10 July 2023 (09:48:11 CEST)
ARTICLE
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
Pantoea agglomerans; plant growth-promotion; Solanum lycopersicum L.; indole-3-acetic acid; siderophores; arsenic resistance; complete genome; horizontal gene transfer
Online: 24 November 2019 (15:29:55 CET)
ARTICLE
|
doi:10.20944/preprints202403.1868.v1
Subject:
Public Health And Healthcare,
Other
Keywords:
beef production chain; Listeria monocytogenes, whole-genome sequencing; sequence type; clonal complexes; virulence factor; antimicrobial genes; plasmids; South Africa
Online: 29 March 2024 (15:54:53 CET)
ARTICLE
|
doi:10.20944/preprints202312.0035.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
Adolescents and young adults (AYA) cancer; molecular profiling; precision oncology; genomics; whole genome sequencing; next-generation sequencing; sarcoma; diagnostic biomarkers
Online: 1 December 2023 (08:09:28 CET)
DATA DESCRIPTOR
|
doi:10.20944/preprints202311.1869.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
Acinetobacter baumannii; healthcare-associated infections; genomic epidemiology; whole genome sequencing; cgMLST; international clones of high risk; antibiotic resistance
Online: 29 November 2023 (10:59:38 CET)
ARTICLE
|
doi:10.20944/preprints202307.1116.v1
Subject:
Public Health And Healthcare,
Public, Environmental And Occupational Health
Keywords:
environmental stressors; pharmaceuticals; antibiotic resistance; selection pressure; public health; tolerant bacteria; environmental pollution; mutation; whole genome sequencing; single nucleotide polymorphisms
Online: 18 July 2023 (05:36:57 CEST)
ARTICLE
|
doi:10.20944/preprints202208.0338.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
migratory birds; Newcastle disease virus-GVII; poultry; phylogenetics; sequence-independent; sin-gle-primer amplification (SISPA); velogenic; whole genome sequencing (WGS)
Online: 18 August 2022 (10:40:10 CEST)
ARTICLE
|
doi:10.20944/preprints201708.0103.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
stem cells; somatic mutations; cancer prevention; carcinogenesis; whole genome sequencing; stem cell division theory of cancer; bad luck of cancer
Online: 30 August 2017 (12:14:52 CEST)
ARTICLE
|
doi:10.20944/preprints202401.0987.v1
Subject:
Biology And Life Sciences,
Parasitology
Keywords:
Genome assembly; Plasmodium falciparum; Long-read sequencing; Nanopore; PromethION; Pf3D7; PfW2
Online: 12 January 2024 (07:01:51 CET)
ARTICLE
|
doi:10.20944/preprints202401.0728.v1
Subject:
Medicine And Pharmacology,
Epidemiology And Infectious Diseases
Keywords:
Hypermucoviscous1; Klebsiella pneumoniae2; Hypervirulent3; Mobile genetic elements4; capsule serotypes5; Virulence6; Whole genome sequencing7; sequence types8
Online: 10 January 2024 (03:51:05 CET)
REVIEW
|
doi:10.20944/preprints202006.0324.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
De-novo Genome Assembly; Short Read Genome Assembly; Long Read Genome Assembly; Hybrid Genome Assembly
Online: 28 June 2020 (08:56:09 CEST)
ARTICLE
|
doi:10.20944/preprints202406.0327.v1
Subject:
Medicine And Pharmacology,
Other
Keywords:
severe COVID-19; severe outcome of SARS-CoV-2 infection; whole-genome sequencing; WGS; genetic susceptibility; rare variants; human rare genomic variants
Online: 6 June 2024 (07:30:51 CEST)
ARTICLE
|
doi:10.20944/preprints202309.0246.v1
Subject:
Biology And Life Sciences,
Ecology, Evolution, Behavior And Systematics
Keywords:
Pax6; Xiphosura; eye evolution; chelicerates; visual system; horseshoe crab; subfuctionalization; gene family evolution; gene duplication; gene regulatory network evolution; whole genome duplication
Online: 5 September 2023 (09:16:05 CEST)
ARTICLE
|
doi:10.20944/preprints202408.1880.v1
Subject:
Chemistry And Materials Science,
Food Chemistry
Keywords:
snacks; polyphenols; antioxidants; whole grain
Online: 26 August 2024 (15:36:50 CEST)
DATA DESCRIPTOR
|
doi:10.20944/preprints202406.1085.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
Draft-Genome; Pumpo; BUSCO; Genome Assembly; SSR Analysis
Online: 18 June 2024 (04:32:53 CEST)
REVIEW
|
doi:10.20944/preprints202309.0168.v1
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
abiotic stress; CRISPR/Cas9; genome editing; genome databases
Online: 5 September 2023 (02:36:28 CEST)